Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0676 ATGGATGTTGCCCCTGAGCAACTCTGCTACATCCCTTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGTAACTTATATGACATAGTGACCGTTCGATGTGGACACTGCAGCAATCTATGGTCAGTGAACATGGCTTCTGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGTTTTCTGGGTGTTATGTTCTCTTTTTGAGAAAATCGAAGCTCCTCTTGGCCTTGACCTTCTCACTTCTCAGGCGTCTGGTGGATACAACAATACGGAGTACAGAATTGGCACAGGTTCCTCTTCCAAATGCAACAATAATATGATTGCAATGAGAGCACCCACCAATCATCATGTCACTAAGGAAAGAAATGTGAACCGGCCTCCCGATAAGAGGCAGCGCGTACCTTCTGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCTAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACAGCTGCGAAGAACTGGGCACACTTCCCTCATATTCATTTTGGGCTGATGTTGGAGACTAACAATAATCAAGCTAAGGTGGAGAATGGAACGTCTGAGAAGCATTTAATGACGAGGGGAGCACTTTTGAACAAATGA 633 0.4439 MDVAPEQLCYIPCNFCNIVLAVSVPCSNLYDIVTVRCGHCSNLWSVNMASAFQSLSWQDVQVFWVLCSLFEKIEAPLGLDLLTSQASGGYNNTEYRIGTGSSSKCNNNMIAMRAPTNHHVTKERNVNRPPDKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNNQAKVENGTSEKHLMTRGALLNK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0676 210 Pfam YABBY protein 4 181 IPR006780 GO:0007275
Lele20g0676 210 Gene3D High mobility group box domain 117 176 IPR036910 -
Lele20g0676 210 SUPERFAMILY HMG-box 125 174 IPR036910 -
Lele20g0676 210 FunFam axial regulator YABBY 5-like 119 177 - -
Lele20g0676 210 PANTHER PROTEIN YABBY 6-RELATED 5 192 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0676 Lele-ChrLele20 13942048 13945825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0676 3 192 C2C2-YABBY Transcription Factor Family AT2G26580 63.158 1.91e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele20g0676 YABBY 8.4e-69 CL0114