Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0669 ATGGACTATTTTGTCTCGTCACCAGATTCCTGTAAGCGTTACAGACATGGTGTGATTGACAAGCAAGATTTGACCAGCAAATTACCTGATAGCCTTCTACATCACATTCTTTCTTTTCTCTCAACCAGAGATGCCATTCGAACCTCCTTATTAACAAGAAGTTGGAAGTTCTTATGGACCTATTTATCTGATTTTGATATTGAAGTTATACAGTCAAGTTCTCACAAGTATGAAACTCAGAAGCAGATGATTAATTGTCTTTTGAATCAAGTAGACACAATACTTGAAAAGGCTAAATTTATAAAAAGGTTCCGTATTGTGGCTTGTGGATTTCCTGTTGATGTAGACCAAGCTAATTCTTGGATCTTTGCGTTGCTAAAGCATAAAATACAGGAGCTGGAACTGTTCTTAGATCTTAGATCTTCCTTTCTGTTAGCCAATAACCTGTCAGTCTCTAAATCGTGGAATATGATGAATCTGGAGGTTGGGTGCGTCTTGAAAGTCCCTAGTTGCATCCATATCCCATGCTTGAAGATTTTGACACTTCAGTTGATAACCTTTGTAGATGAAACATCAGCCCAACGACTTTTCTCTAGTTGCCTAGTCCTCCAAAAGCTGACCTTGCGTGGTTGTGACTGGAAGAATGTCAGTAATGTCAGCTTAGAAATTCCAAAATTGACAACCTTAATCATTGAGGAAGACTTCAGTCCAAGATTATTTTTGCAATTGTTCTTTCCTGCAGAAAATCTCCTTTTGCGCCTTCCTACATTCCACAATTTGACCCATATTGGTGTTGATCAAGGAATGCATGACTTTACTGGTGAAACACTGATGGACATTCTTGAGAAGTCTCCTAAGCTGGAATTTCTTGACATTGTTGATGTACATCCTGGATTCGACCCAGATTCCTCGTCAGATGATGGGGAAGCCTGGACAATGAGATCGGGGCCTCATTGTTTAAAGTCTAGTCTGAAATTGGTTAGCATTTCGGATTTTCGTGGTAGGGTAGCTGAGATGCAAATGCTTAGCTTTCTGGTAAATGCAACCATTTTGAGAAGAATCGAGATATTCTGTGAGCAGTGCTTGTCAGCAGATTTGAAGAAGCAAGCAGATATCAAGAATCAGTTGCAAGTAATGCCTAAAGGCTTAGAGAGCAGAATTTCTGGATCAAGGAGTCTTCTTTTTGTTTTTGATGATTTCACAGTATTCCAGAAATATCAAAACCAACCACCTCGTAACAAAGAGAACAACAACATGGCCAAACACATTGGCTTGCTAGGTTTCTCCATTGTTGCACTGTCCTTATTATTTGCAGCAACAGAGGCAAGACAATACATTGTCGGTGACAGCTTTGGATGGAACATCCCTCCCAATCAGACCTTCTATTCTGACTGGGCTCGCTCCAAGACCTTCTTCGCCGGAGACTCTCTCGTGTTCAACTGGACTGGGAACAACAACGTGGCTGATGTATCAATGGCAGATTACAACAACTGCACCAGCATGAGTCCGTTCGCCGGTCCAAACGGGGTTACGATTAACCTGCTTCATCCGGGGCCTCGCTACTTCATCTGCACTGTCGACGATAACTGTGAAAGAGGCCAGAAGTTCAGTATCAACGTTGAGTGGCCATTCCCTCCTTTAGCTCAGCCACCATCTTCTTCTCCTCCAACAACTCTGTCTTATGGGCTCTTGTCTGCATTTCTCTCAACCATTGCTGTTTATCTCTTCACCCTCGTCTAG 1740 0.4201 MDYFVSSPDSCKRYRHGVIDKQDLTSKLPDSLLHHILSFLSTRDAIRTSLLTRSWKFLWTYLSDFDIEVIQSSSHKYETQKQMINCLLNQVDTILEKAKFIKRFRIVACGFPVDVDQANSWIFALLKHKIQELELFLDLRSSFLLANNLSVSKSWNMMNLEVGCVLKVPSCIHIPCLKILTLQLITFVDETSAQRLFSSCLVLQKLTLRGCDWKNVSNVSLEIPKLTTLIIEEDFSPRLFLQLFFPAENLLLRLPTFHNLTHIGVDQGMHDFTGETLMDILEKSPKLEFLDIVDVHPGFDPDSSSDDGEAWTMRSGPHCLKSSLKLVSISDFRGRVAEMQMLSFLVNATILRRIEIFCEQCLSADLKKQADIKNQLQVMPKGLESRISGSRSLLFVFDDFTVFQKYQNQPPRNKENNNMAKHIGLLGFSIVALSLLFAATEARQYIVGDSFGWNIPPNQTFYSDWARSKTFFAGDSLVFNWTGNNNVADVSMADYNNCTSMSPFAGPNGVTINLLHPGPRYFICTVDDNCERGQKFSINVEWPFPPLAQPPSSSPPTTLSYGLLSAFLSTIAVYLFTLV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0669 579 FunFam Cupredoxin superfamily protein 442 544 - -
Lele20g0669 579 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 252 381 - -
Lele20g0669 579 SUPERFAMILY F-box domain 21 64 IPR036047 GO:0005515
Lele20g0669 579 Gene3D - 14 62 - -
Lele20g0669 579 Pfam FBD 315 353 IPR006566 -
Lele20g0669 579 Gene3D Ribonuclease Inhibitor 63 391 IPR032675 -
Lele20g0669 579 ProSiteProfiles F-box domain profile. 22 58 IPR001810 GO:0005515
Lele20g0669 579 Pfam F-box domain 26 59 IPR001810 GO:0005515
Lele20g0669 579 SUPERFAMILY Cupredoxins 441 540 IPR008972 -
Lele20g0669 579 SUPERFAMILY RNI-like 170 295 - -
Lele20g0669 579 Gene3D - 440 542 IPR008972 -
Lele20g0669 579 SMART fbox_2 28 69 IPR001810 GO:0005515
Lele20g0669 579 Pfam Plastocyanin-like domain 453 534 IPR003245 GO:0009055
Lele20g0669 579 CDD Stellacyanin 444 540 - -
Lele20g0669 579 ProSiteProfiles Phytocyanin domain profile. 443 542 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0669 Lele-ChrLele20 13900040 13903570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0669 429 553 Phytocyanin Superfamily AT2G25060 34.615 3.28e-17 78.2