Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0661 ATGGACCTTCAACTCGGCCTTTCTCTCAATTCTTGTTCCTTTGATTCCGATGATGACGATCTCTTCTCTTCATCGTTCCCTGTCATCTCTCACAATAAGAAACGTAGCTTCACCAATCTCAGAGAAGAACACGACGACGACGACGACGACGTTTTGCTTCCAACTTTGCCTCTCCTTCCCTTAACACCTTCCCATGAAGCTGACCTTGACAACGACCTCCGCACCAGCTCCTCCATCGTCACCAAACATGATGGGGATGATGGTGGAGAATCTGCAGCAGTAGGGTGGCCGCCATTAATGTCTCAGAGGAAGAAGCTTCGCTGTGAAGAAGATGGCGGCATGGCGGGGATTATTCGTCATTACGTGAAAGTGAAGATGGAGGGAGATGGAATTGGACGAAAGGTTGATCTGAGCTTGCATCATTCTTTTCAGAAGCTCAAGGAAACCTTGATCGCCATGTTTGGAAAATGTAATCATCATTCAGACTGCTATGAATTGGCTTATCAGGACAGAGAAGGTGACTGGTTGCTTGCAGAGGATCTGCCATGGAAGTAA 555 0.4739 MDLQLGLSLNSCSFDSDDDDLFSSSFPVISHNKKRSFTNLREEHDDDDDDVLLPTLPLLPLTPSHEADLDNDLRTSSSIVTKHDGDDGGESAAVGWPPLMSQRKKLRCEEDGGMAGIIRHYVKVKMEGDGIGRKVDLSLHHSFQKLKETLIAMFGKCNHHSDCYELAYQDREGDWLLAEDLPWK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0661 184 Gene3D - 115 184 - -
Lele20g0661 184 ProSiteProfiles PB1 domain profile. 119 184 IPR000270 GO:0005515
Lele20g0661 184 Pfam AUX/IAA family 32 156 IPR033389 -
Lele20g0661 184 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 183 IPR003311 GO:0005634|GO:0006355
Lele20g0661 184 SUPERFAMILY CAD & PB1 domains 120 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0661 Lele-ChrLele20 13835337 13836169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0661 119 183 B3 DNA Binding Superfamily AT2G46530 38.806 5.11e-07 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele20g0661 AUX_IAA 1.9e-13 CL0072