Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0660 ATGAGAATTTTCCAGAAGAAAAGGGAAAGGATTGGTTCAGTATGTGGTGAGACAGCATTAGTTCTCTATCTATGCGATCGTCTGAAGAGAGGAGGGAAGAGTTGCAGGCTAAGATGGAAGAACTATTTGAGACCTGACATTAAACGCGGAGAACTGTCTGAAGAAGAAGAAGACCTTATCATCAGATTGCATAAGCTTCTTGGCAACCGAATTCCTGGTAGAACCGATAACGAAGTGAAAAACTACTGGAATAACTATTTGAACAAGAGATGCCCTCGAGGCAAAAGGAAAGCAATCGATTCAAACAGCGATCACCAAGAAACCAGCAATAAATCACGAATCAGCGACTCTCAGTTTCCGATTTCCTCAAACATTGCAGAGACAGGATTGTTGTTGGATGAGAGGAAAGAAGAGAACTGTAACATCACAAAGTCTTGGATCGACGAAACGCAGAGCTTCGACTGTGACCTAGATTTTCCGATTGTACCTGCAGGGAACAGTGAGGCATTTGGTTTCGACGATGGGGGCTGA 531 0.435 MRIFQKKRERIGSVCGETALVLYLCDRLKRGGKSCRLRWKNYLRPDIKRGELSEEEEDLIIRLHKLLGNRIPGRTDNEVKNYWNNYLNKRCPRGKRKAIDSNSDHQETSNKSRISDSQFPISSNIAETGLLLDERKEENCNITKSWIDETQSFDCDLDFPIVPAGNSEAFGFDDGG 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0660 176 Gene3D - 9 47 - -
Lele20g0660 176 MobiDBLite consensus disorder prediction 94 111 - -
Lele20g0660 176 ProSiteProfiles Myb-like domain profile. 44 87 IPR001005 -
Lele20g0660 176 Pfam Myb-like DNA-binding domain 49 87 IPR001005 -
Lele20g0660 176 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 27 136 - -
Lele20g0660 176 SMART sant 48 89 IPR001005 -
Lele20g0660 176 MobiDBLite consensus disorder prediction 94 118 - -
Lele20g0660 176 CDD SANT 53 87 IPR001005 -
Lele20g0660 176 Gene3D - 48 93 - -
Lele20g0660 176 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 91 IPR017930 -
Lele20g0660 176 SUPERFAMILY Homeodomain-like 29 91 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0660 Lele-ChrLele20 13825207 13828453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0660 28 173 MYB Transcription Factor Family AT5G52600 43.949 1.01e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele20g0660 Myb_DNA-binding 1.9e-07 CL0123