Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0658 ATGGAGAAGAAGTGTGGGTGCTGGCCTGTTCTGAAACGCGGCGTTAGAGGTGCGTGCAAACCCTCAGCTTCTAGAGACTCTGCTTGCGCTATTCCTCGTACTAGTCTCGTTTATGATGCAGCGACTGAGACACGTTACCTGAATGCTAGTAATCGAGAGTTATGTCCTCCCAATGATGCTCAACTATCTTATGATAATACTGTACCCCCACCTGAGGAAAACTGGGCTCCTTGCCAACTCCTTCAATTTTCTTTTCAGGAACTAAAATCGGCAACCGGAAATTTCAGACCTGATAGCATTCTCGGGGAAGGTGGGTTCGGATTTGTGTTCAAGGGATGGATAGAGGAAAATGGTACAGCACCGGCCAAACCAGGTTCAGGGGTTACGGTGGCTGTAAAAAGCTTGAAGCCAGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTCCTTGGACAGCTTCACCATCCTAACCTTGTGAAACTTATTGGTTACTGCATTGAAGATGATCAGCGGCTTCTTGTTTATGAGTTTATGACCCGTGGAAGCCTGGAAAATCATCTTTTCAGAAGAACTGTGCCTCTTCCATGGTCCAATAGGGTAAAGATTGCACTCGGTGCAGCTAAAGGGTTGGCCTTCCTCCATAGTGGTCCAGAACCAGTCATTTATAGAGATTTTAAAACATCAAACATTTTGCTTGATTCGGAGTATAATGCGAAGCTTTCAGATTTTGGTCTAGCTAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTGTTGGAACTTATGGTTATGCAGCTCCTGAATATGTCATGACAGGACACTTGACAGCTAAAAGTGATGTTTACAGCTTTGGAGTTGTATTACTTGAGATTTTAACAGGGAGAAGATCTATGGACAAGAAGCGCCCTAGTGGGGAACAAAATCTGGTATCATGGGCTCGGCCATATTTAGCTGACAAGCGAAAGCTATACCAACTGGTGGATCCTCGTTTGGAACTGAACTATTCTCTCAAAGGGGTGCAGAAAATTTCTCAGTTAGCTTATAATTGCCTCAGTAGGGACCCTAAATGCCGTCCTAACATGGATGAAGTTGTGAAGGCTCTGACTCCATTGCAGGATCTCAATGATCTTGCAATCTTATCCTACCACTCCCGTTCATCGTCTCAACATGGGAGAAGAAAAAAGAAAGCAGATGGAACTCCACATCCACAGCTTGCCTACACACAATCCAAGAGCATCAAGGGTACTTCTCCCTTGAACACCAGCAAGCATCATCGATGA 1299 0.4527 MEKKCGCWPVLKRGVRGACKPSASRDSACAIPRTSLVYDAATETRYLNASNRELCPPNDAQLSYDNTVPPPEENWAPCQLLQFSFQELKSATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGVTVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHSGPEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYNCLSRDPKCRPNMDEVVKALTPLQDLNDLAILSYHSRSSSQHGRRKKKADGTPHPQLAYTQSKSIKGTSPLNTSKHHR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0658 432 FunFam Serine/threonine-protein kinase BIK1 66 180 - -
Lele20g0658 432 SUPERFAMILY Protein kinase-like (PK-like) 79 381 IPR011009 -
Lele20g0658 432 MobiDBLite consensus disorder prediction 409 425 - -
Lele20g0658 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Lele20g0658 432 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Lele20g0658 432 Pfam Protein tyrosine and serine/threonine kinase 99 374 IPR001245 GO:0004672|GO:0006468
Lele20g0658 432 PANTHER OS01G0588500 PROTEIN-RELATED 78 378 - -
Lele20g0658 432 Gene3D Transferase(Phosphotransferase) domain 1 181 393 - -
Lele20g0658 432 CDD STKc_IRAK 101 377 - -
Lele20g0658 432 FunFam Probable serine/threonine-protein kinase PBL8 181 394 - -
Lele20g0658 432 ProSiteProfiles Protein kinase domain profile. 95 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0658 432 Gene3D Phosphorylase Kinase; domain 1 72 180 - -
Lele20g0658 432 MobiDBLite consensus disorder prediction 390 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0658 Lele-ChrLele20 13799828 13803128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0658 83 374 Glycoside Hydrolase AT3G07070 56.081 5.56e-111 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele20g0658 PK_Tyr_Ser-Thr 8.1e-49 CL0016