Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0643 ATGGTTATCCCTACATTATTCTTAACGCTATTGCCGCTACTGCCTAGCATTTTTGCCACCGGTTCTTTCTTACAGTCTACTGATTGTGGCCCTAATTGGGTAGCCTACTCATATTCTCTTCGCGAGGAATTTTACTACGTAAACGAGAATATAGTGGACAAAGTTACTTTCTGCAAGACCCTTCAACTGTATATTGCAAATGGTTGCGATTTGAAGGACTACTTTGAAAGTAGCAAATGTGCCCTGGATGCTGTTACAGTTAATTTACCTTCAAAGGCAGGAAGAAAACTTCTGCAAAAGGATTTAAACAATAATTCCACATCTCAATCTCACCAAAATGTTTCTAAGAATGTGTCATTCCCTCATGTTGGGATGGTTGCATGTGGAGCTTTCTTGGTATGTTGTGTAGCTATCTGTCCTTGTATCTATGGGAAGAGACGAAAAGCCACTACTCATGCTGATTTATCCAAGGACACACATTCAATTGATTCGGCCTCCCCCTTTGAAGTAAATGCTGTTTCTGAAAAGGTGCCTGCAAGTCCACTCCGTGTGCCCCCTAGTCCTTCAAGATTCTCATTGTCCCCAAAACTCAGTAGAATTGGGTCATTACATCTTAACTTGAGTCAAATTGTAAAAGCTACCCATAATTTCTCAGATACTTTACAAATAGGAGAAGGCGGTTTTGGAACTGTCTACAGGGCTCAGCTCGAAGATGGATTGGTTGTGGCCGTGAAACGTGCAAAAAGGGAACATTTTGAGACGTTGAGAACTGAATTCAGCAGTGAGGTTGAAATCCTGGCCAAAATTGATCATCGAAACTTGGTTAAGCTACTAGGTTACGTTGACAAAGGAAATGAACGCCTTCTTATTACGGAGTATGTGGCAAATGGTTCTCTTAGAGAACATTTGGATGGTCTACGTGGAAATATCCTAGATTTCAATCAGCGCCTTGAAATTGCTATTGATGTTGCTCATGGGTTGACCTATCTGCATACATATGCAGAAAAGCAGATTATCCATCGGGATGTGAAATCATCCAACATTCTTCTGACAGAAAGCATGAGAGCCAAAGTTGCTGATTTTGGATTTGCAAAGCTTGGTCCCACGAACTCTGATCAGACACACATTTCAACCAAAGTGAAAGGAACAGTTGGTTATTTGGATCCTGAGTACATGAAAACATACCAACTCACTCCCAAGAGTGATGTTTACTCATTTGGAATTTTGCTCCTAGAAATTTTGACAGGCCGCCGTCCGGTGGAGTTGAAGAAACCAGTTGAAGAGCGGGTTACATTACGATGGGCGTTCAGGAAGTTCAATGAAGGAAATGTGCTGGCACTGCTGGATCCTGCAATGAAGGAAAGTGTAAATACAGAGGTTGTCATGAAGATGATTGAATTGGCATTCCAATGCGCAGCACCGGTTAGAGCAGATCGACTGGACATGAAATCAGTGGTCCAGCAATTGTGGACCATAAGAGCAGAATACCTCAAGGGTACAAGGAGAGCATAG 1512 0.4213 MVIPTLFLTLLPLLPSIFATGSFLQSTDCGPNWVAYSYSLREEFYYVNENIVDKVTFCKTLQLYIANGCDLKDYFESSKCALDAVTVNLPSKAGRKLLQKDLNNNSTSQSHQNVSKNVSFPHVGMVACGAFLVCCVAICPCIYGKRRKATTHADLSKDTHSIDSASPFEVNAVSEKVPASPLRVPPSPSRFSLSPKLSRIGSLHLNLSQIVKATHNFSDTLQIGEGGFGTVYRAQLEDGLVVAVKRAKREHFETLRTEFSSEVEILAKIDHRNLVKLLGYVDKGNERLLITEYVANGSLREHLDGLRGNILDFNQRLEIAIDVAHGLTYLHTYAEKQIIHRDVKSSNILLTESMRAKVADFGFAKLGPTNSDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEILTGRRPVELKKPVEERVTLRWAFRKFNEGNVLALLDPAMKESVNTEVVMKMIELAFQCAAPVRADRLDMKSVVQQLWTIRAEYLKGTRRA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0643 503 Pfam Protein tyrosine and serine/threonine kinase 222 489 IPR001245 GO:0004672|GO:0006468
Lele20g0643 503 ProSitePatterns Protein kinases ATP-binding region signature. 223 245 IPR017441 GO:0005524
Lele20g0643 503 Gene3D Transferase(Phosphotransferase) domain 1 294 501 - -
Lele20g0643 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Lele20g0643 503 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 294 503 - -
Lele20g0643 503 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 189 293 - -
Lele20g0643 503 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 92 494 - -
Lele20g0643 503 Gene3D Phosphorylase Kinase; domain 1 190 293 - -
Lele20g0643 503 ProSiteProfiles Protein kinase domain profile. 217 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0643 503 SUPERFAMILY Protein kinase-like (PK-like) 199 492 IPR011009 -
Lele20g0643 503 SMART serkin_6 217 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0643 503 CDD STKc_IRAK 223 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0643 Lele-ChrLele20 13639132 13642599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0643 127 489 Receptor kinase-like Gene Family AT3G46290 40.054 5.26e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lele20g0643 PK_Tyr_Ser-Thr 2.8e-51 CL0016