Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0635 ATGGTGAAGGGGAAGCTTATACTGATAAGCCAATCTGGTGGTAAATTTTTGACAAATGACAATGGATCTATGTCGTATACTGGAGGCGAAGCACATGCAGTGGAGATTAATCATGAAACAAGTTTTGATGATCTCAAGCTAAAACTTGCTGAATTATGGAACTTACAAAGTAAGACCTTGTCCATCAAGTATTTTCTTCCGGGGAACAGGAAAACTTTAATCTGTATATCAAATGATCGAGACCTAAAGAGGATGAAAGAATTTTATGTGGATTCAATTACTGCTGACCTTTTTATTTCTGGGGAAGAAGGGTTTGACCAGGAATCGTTAAACATGAATACCAGAAATGATATAATAGTCGCCGAAGCTGTGACCCCTGCCAATCCTTCAAAAGCAAAACCTAAAACTGTTCGCAAACAAATAGCATCAGGTATGGCTGTTTCTACCTTAATTTCCCCACTTGCTTGTGTGCGAAATTTGCTGACTTCCTTATCTGCAAAATTGACTTTCATGAGTCTCCCTGCAGAAGGCACTTCAGCAAACCGTTCTCCAAAGCATGCTGTTACTAATAATCACAGTGCTGCCTATTCCGATCCACCTTGTTCTGTTGATATGGATGCTAGTCCTGCAGATGCAGTTAAGAAGCGAAGGCGTGCTGCATCTCGTGCAGTTACCGCAAATGGTCCTACACAAGAAAGTAAAAAAGTGATGTCATGGAAAAAGAATAAGAAAAATCATGGTGGTGGAGTTGCTGATAATGGAGAGCTCCAACTATATTTTCCGAGTAATGACTTTTCTGGTGATTTACTTGATGTTGAATCTGTTATGACGCCGGGAAAATTAGCTGAATGTTGGAAAGACAGTGTTACTGGGGTTGGACAGGACTTTGCAAGTGTCCAAGAATTTCGTGACGCCTTGCAGAAATATGCCATTGCACATCATTTTGCATATAGGTATATCAAGAATGACACAATTCGTGCCAGAGCCAGATGTGCATGTGAAGACTGTCCATGGAGGATTTTTGCTTCCTGGGTCCCATCTGCTCAATCATTTAGAATTAAAAATATTGAGGAGCCACATACTTGTGGAGGAAAATCTTGGAAGTCTACTCATCCCTCAAAGAACTGGTTGGTAAACGTTGTAAAGGACAGATTACGAGATAACTTTCATTCCAAAACAAAGGAGATTGCTAGTGGCATTCACCGAGACTTTGGGATTGAGGTGAATTACTCTCAAGTATGGCGTGCAGTCGAGGAAGCTAGGGAACAACTGCAAGGTAGGCCTTCTTTGCCGGTTAATTTTCTATCTGCTGCGCATGCACTGCGGCTCAATGGTTTTAAAATGTTTTTAGAACAGATTAGAAAGGTTTCTCCAACAGCATATGATTGGGTCATGGAAGTTGAACCAGAGCAATGGGCAAGTGCTGCATTTAAAGGTGAGCGATATAATCATATTCTTGTAGACGTTGCTGAGATATACACCATGTGGATCGACGAAGTGCGAGAACTACCCATAACACAAAAGGTGGAAGCACTTAGACATAAGATCATGGAGTTAATAAACAATCGTCGAGCTGCTTTAAGTAGTTGGACATTGAAACTGACTCCATCAAAGGAGGAACTGCTACAAGGCGAATCCCTCAGGGCCCAAGGCCTTAAAGTATTGTTCTCATCAGACACCGTGTTCGAGGTTCACGATGATTCAGTCCGTGTGGTGGATATCGAAAGGTGGGATTGTAGCTGTTTGAGATGGAAAGCAACAGGGCTGCCATGCTGCCATGCTATCGCTGTCTTGAATTGCACCCATCGAAATGTATATGACTACTGTGCGAAACACTTCTCTGTTGATAACTTCCATCGCGTGTACTCGGAATCCATAAATCCTGCTTCTGATTATTTATCCATAAATATAAATCCTGCTTCCTATGATTTGGACAATAACGACGAGGAAGCCGAGCAGGAGGAGACTGAGACAGAGAAAGAAACTGAGTTTAATGTACTTCCTCCTAGCAATTCTAGACCTTATGGCCGAAAGAAAGATGAGAATACAACAACAAAGAAATCTAGGAAGACTGTTACATGTACCAAGTGCAAAGGAAGAGGCCATAATAAGGCTACTTGTAAAGAGACATTGTGA 2136 0.4157 MVKGKLILISQSGGKFLTNDNGSMSYTGGEAHAVEINHETSFDDLKLKLAELWNLQSKTLSIKYFLPGNRKTLICISNDRDLKRMKEFYVDSITADLFISGEEGFDQESLNMNTRNDIIVAEAVTPANPSKAKPKTVRKQIASGMAVSTLISPLACVRNLLTSLSAKLTFMSLPAEGTSANRSPKHAVTNNHSAAYSDPPCSVDMDASPADAVKKRRRAASRAVTANGPTQESKKVMSWKKNKKNHGGGVADNGELQLYFPSNDFSGDLLDVESVMTPGKLAECWKDSVTGVGQDFASVQEFRDALQKYAIAHHFAYRYIKNDTIRARARCACEDCPWRIFASWVPSAQSFRIKNIEEPHTCGGKSWKSTHPSKNWLVNVVKDRLRDNFHSKTKEIASGIHRDFGIEVNYSQVWRAVEEAREQLQGRPSLPVNFLSAAHALRLNGFKMFLEQIRKVSPTAYDWVMEVEPEQWASAAFKGERYNHILVDVAEIYTMWIDEVRELPITQKVEALRHKIMELINNRRAALSSWTLKLTPSKEELLQGESLRAQGLKVLFSSDTVFEVHDDSVRVVDIERWDCSCLRWKATGLPCCHAIAVLNCTHRNVYDYCAKHFSVDNFHRVYSESINPASDYLSININPASYDLDNNDEEAEQEETETEKETEFNVLPPSNSRPYGRKKDENTTTKKSRKTVTCTKCKGRGHNKATCKETL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0635 711 Pfam PB1 domain 24 91 IPR000270 GO:0005515
Lele20g0635 711 ProSiteProfiles Zinc finger SWIM-type profile. 570 602 IPR007527 GO:0008270
Lele20g0635 711 MobiDBLite consensus disorder prediction 220 247 - -
Lele20g0635 711 SUPERFAMILY CAD & PB1 domains 22 92 - -
Lele20g0635 711 Pfam MuDR family transposase 289 353 IPR004332 -
Lele20g0635 711 MobiDBLite consensus disorder prediction 645 659 - -
Lele20g0635 711 SMART PB1_new 19 102 IPR000270 GO:0005515
Lele20g0635 711 SMART 26again6 577 604 IPR006564 GO:0008270
Lele20g0635 711 Pfam SWIM zinc finger 568 600 IPR007527 GO:0008270
Lele20g0635 711 MobiDBLite consensus disorder prediction 643 690 - -
Lele20g0635 711 PANTHER POLYPROTEIN, PUTATIVE-RELATED 436 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0635 Lele-ChrLele20 13597821 13600648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0635 2 89 MAP Kinase Kinase Kinase AT1G79570 33.333 7.19e-07 50.8