Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0625 ATGGCGAATCTGAAAGTAGGTAGTCGACCGCCATGGGTGGGGCTCGGAGCTGCTGTGTGGATTCAAATAGCTTCTGGAAACGCCTACACCTTCCCTCTCTACTCTCACTCTCTCCGATCCGTTCTGGGTTTTAACCAGCGCCTGATCGCCTTGCTCGGTGTTGCCAACGATATCGGCGAGAACGTTGGCCTCCTTCCTGGTCTCGCCTCCAACAAGTTCCCTCCTTGGCTTATTCTCTCTGTCGGTGCTCTTCTCTCTTTTCTTGGCTATGGCGTTCTCTGGCTCTCTGTTAGTCGTACTGTTCTCTCTCTTCCTTACTGGTTGTTATGGATTGCTTCAGTTGTTGCCACCAACAGTACTGCATGGTTAACCACAGCTGTTCTTGTCACCAACATGAGAAACTTCCCTGTTAGCAGAGGCTCAGTCGCCGGAATCCTCAAAGGCTATGGAGGCTTAAGTGCTGCAGCTTTCACTGAAATTTACGTCCTAGTTCTTCACAAATCTTCCTCTAAGTTCATCTTGTTCCTTGCCCTTGGCATTCCTATTACATGTTTCACCTTGATGTTTCTTGTCAGGCATTGTACTCCTGCTTCCGGCGAAGATTCCTCAGAAAATAGCCATTTTGTCTTCATCCAAGCCTCTAGTGTTGTCCTAGGTTTCTACCTTCTTGCAACCACAGTACTTAGCGATGTTGTCTCCTTAAGTGATGTAGTGTCCTATGTTTTGATCTTTGTGATGATCCTCCTGTTAATGGCTCCTCTTGCTGTCCCTATAAAGATGACATTATTTCCCAGAAAAGCCGTCAAACCAGAAGCACCTGAGGCACAAGTAGGATCTTCAGAGCTTGACGAGAAGTCAGAACCTTTGTTGCTCGCGGAATCTTCATCGTCAGCAACGCTTGGGAGTTTTTATGAGAATTACGAGTCATCTGAGGTGGCTATGCTTCTTGCGGTGGGTGAAGGGGCAGTGAGTAAGAAGAGGAGGAGGCCTAAAAGAGGGGAAGATTTTAACTTTCGCGAGGCGGTGATCAAAGCTGATTTTTGGCTCTTGTTTCTGGTTTTCTTTGTTGGTGTAGGAACTGGGGTTACTGTGGTAAATAATCTAGCACAGATTGGGATTGCACAAGGTGTGGAAAACACCACAATCTTGTTGTCCACTTTTAGCTTCTGCAATTTCGTCGGTAGGCTTGGTGGAGGAGTTGTTTCAGAATATTTTGTCAGAACAAAAACAATCCCAAGAACAGCATGGATGACATGCACACAGATAATAATGATAATCTCGTACCTGCTGTTTGCATATACTGTGAGTGGAACTCTTTATCCTGCAATAGCATTCCTAGGAATCTGCTATGGCGTGCAGTTTTCTGTAATGATTCCTACAGTTTCTGAGTTATTTGGCCTGAAAAATTTTGGTGTTCTCTACAACTTCATGTTGTTGGGAAACCCACTTGGTGCATTCCTCTTCTCGGCCCTCTTAGCCGGCCATGTCTACGACGCCGAAGCAGCCAAGCAGCATGGTCTGAGTCAACTGGGGCATGACTCTATAACTAAGGCCTGTGTTGGTGCCTCCTGCTTTAAGCTAACCTTTATGGTTTTGGCTGGTGTGTCTGCTGTAGGCACCCTCTTGAGCATTATTTTGACCTTGAGGGTGAAGCCTGTTTATCAGATGCTTTATGCTGGTGGTTCTTTTAGGCTTCCCCAATCCTCTTCAAGCCATTAA 1719 0.4631 MANLKVGSRPPWVGLGAAVWIQIASGNAYTFPLYSHSLRSVLGFNQRLIALLGVANDIGENVGLLPGLASNKFPPWLILSVGALLSFLGYGVLWLSVSRTVLSLPYWLLWIASVVATNSTAWLTTAVLVTNMRNFPVSRGSVAGILKGYGGLSAAAFTEIYVLVLHKSSSKFILFLALGIPITCFTLMFLVRHCTPASGEDSSENSHFVFIQASSVVLGFYLLATTVLSDVVSLSDVVSYVLIFVMILLLMAPLAVPIKMTLFPRKAVKPEAPEAQVGSSELDEKSEPLLLAESSSSATLGSFYENYESSEVAMLLAVGEGAVSKKRRRPKRGEDFNFREAVIKADFWLLFLVFFVGVGTGVTVVNNLAQIGIAQGVENTTILLSTFSFCNFVGRLGGGVVSEYFVRTKTIPRTAWMTCTQIIMIISYLLFAYTVSGTLYPAIAFLGICYGVQFSVMIPTVSELFGLKNFGVLYNFMLLGNPLGAFLFSALLAGHVYDAEAAKQHGLSQLGHDSITKACVGASCFKLTFMVLAGVSAVGTLLSIILTLRVKPVYQMLYAGGSFRLPQSSSSH 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0625 572 CDD MFS_Mch1p_like 10 540 - -
Lele20g0625 572 SUPERFAMILY MFS general substrate transporter 236 552 IPR036259 -
Lele20g0625 572 SUPERFAMILY MFS general substrate transporter 11 194 IPR036259 -
Lele20g0625 572 Pfam Nodulin-like 11 258 IPR010658 -
Lele20g0625 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 555 - -
Lele20g0625 572 Gene3D MFS general substrate transporter like domains 342 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0625 Lele-ChrLele20 13527547 13531138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0625 5 572 Nodulin-like Gene Family AT1G80530 55.458 0.0 646