Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0622 ATGGCCATGGCTACTTCTCCTTTCCTTCACCCTATCCACAAACTGGAATTCCCAAGATGCTTCTTCCTTCCACTGAATTCCCAATTCCCTCCTCGTCTCCATTTTCTCCCTCGTCGATTCCTCTCCTCCTCAACCATCCGTGCAAGCTCCGCTGTTCTTATGGAGTCGGATACAAGTCTGCGACAGGATCAAGCAAAGGAAACTGAAATCTTTGCCTGCCCAGTATGTTATGAACCTTTGATAAGAAAAGGTCCATCTGGACTTAACCTATCAGCAATCTACAGGTCTGGTTTTAAGTGTAAAAGATGCAATAAATCATACTCTAGCAAAGACATGTATTTGGATCTAACTGTCACTGCTGGATTGAGGGATTACACTGAAGTTCAACCAGTCAGGACTGAGCTTTTCAGGAGTCCACTTGTTTCATTCTTGTATGAAAGAGGCTGGCGTCAGAGTTTCAATCGAAGTGGTTTTCCTGGCCGTGATGAAGAGTTCAAAATGGCTCAAGAGTACTTCAAATCTGCTGAAGGTGGTCTTCTTGTTGATGTCAGCTGCGGTAGCGGTTTATTTTCCCGAAAATTTGCCCAATCTGGAGTCTATTCTGGTGTTATTGCTCTAGATTTTTCTGAAAATATGCTTCGCCAGTGTTACAATTTCATCAAGCAGGATGACATTCTTTTAACCAATAATCTTGCTCTGGTAAGGGCAGATGTTTCTAGGCTTCCCTTCTCATCAGGTTCAGTTGATGCTGTTCATGCTAGTGCAGCCTTGCACTGTTGGCCATCTCCCTCCAATGCTATTGCTGAAATCGCCCGCATACTAAAAAGTGGTGGAGTCTTTGTCGGAAGCACTTTTCTTCGCTACACTTCATCAACTCCCTGGATTATACGGCCTTTCCGAGAGAGAAGTCTGCAGGGCTATAGTTATTTGACAGAGGAAGAGATAGAAGACCTTTGCACTTCATGCGGTCTCACCAATTACTCCCGCAAAATTCAACAGTCCTTTATTATGTTTTCTGCTCAGAAACCTTAA 1032 0.438 MAMATSPFLHPIHKLEFPRCFFLPLNSQFPPRLHFLPRRFLSSSTIRASSAVLMESDTSLRQDQAKETEIFACPVCYEPLIRKGPSGLNLSAIYRSGFKCKRCNKSYSSKDMYLDLTVTAGLRDYTEVQPVRTELFRSPLVSFLYERGWRQSFNRSGFPGRDEEFKMAQEYFKSAEGGLLVDVSCGSGLFSRKFAQSGVYSGVIALDFSENMLRQCYNFIKQDDILLTNNLALVRADVSRLPFSSGSVDAVHASAALHCWPSPSNAIAEIARILKSGGVFVGSTFLRYTSSTPWIIRPFRERSLQGYSYLTEEEIEDLCTSCGLTNYSRKIQQSFIMFSAQKP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0622 343 FunFam Putative methyltransferase, chloroplastic 136 342 - -
Lele20g0622 343 PANTHER METHYLTRANSFERASE 81 330 - -
Lele20g0622 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 343 IPR029063 -
Lele20g0622 343 Pfam Methyltransferase domain 181 281 IPR013216 GO:0008168
Lele20g0622 343 Gene3D Vaccinia Virus protein VP39 136 342 IPR029063 -
Lele20g0622 343 CDD AdoMet_MTases 180 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0622 Lele-ChrLele20 13500670 13504134 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele20g0622 Methyltransf_11 4.3e-21 CL0063