Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0618 ATGTCATCTTGTACAATATTGGGCATTGGATCTGAGCTTCTCATAATTTTCTTTCAAAGCAATGGAATGTATCATTATGCTCTATCACTTGATTTTTCTGGCTCAAAGAAATCTGGGAAGGGAAAGAGGCCTGGAAAAGGTGGGAATCGTTTCTGGAAATCTATTGGGTTGGGGTTCAAGACTCCCAGGGAGGCCATTGAAGGAACCTATATTGATAAGAAGTGCCCCTTCACTGGTACTGTTTCTATCCGAGGTCGTATCTTAGCTGGCACTTGTCACAGTGCAAAGATGACAAGGACCATTATTGTTCGGAGGAATTATCTTCATTTTGTCAAGAAATATCAGAGATATGAGAAGAGGCATTCAAATATTGCTGCTCATATATCACCTTGCTTTCGTGTGAAGGAAGGGGATCATGTTATTATTGGCCAATGCAGTCACTGCTCTTTTAACCCTCATTTTGATGATAATCCTAGAGGCCAAGGTCCTGGACTCTGGATGAGGCCGCTCTCAAAGACGGTGAGGTTCAATGTGTTGAAGGTGATTCCTGCAGGATCTTCTGGTGGTGTGAAGAAGGCATTCACTGGAGCCTAA 594 0.4293 MSSCTILGIGSELLIIFFQSNGMYHYALSLDFSGSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMTRTIIVRRNYLHFVKKYQRYEKRHSNIAAHISPCFRVKEGDHVIIGQCSHCSFNPHFDDNPRGQGPGLWMRPLSKTVRFNVLKVIPAGSSGGVKKAFTGA 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0618 197 FunFam 40S ribosomal protein S11 25 156 - -
Lele20g0618 197 Pfam Ribosomal_S17 N-terminal 34 88 IPR032440 -
Lele20g0618 197 Pfam Ribosomal protein S17 90 151 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele20g0618 197 SUPERFAMILY Nucleic acid-binding proteins 84 149 IPR012340 -
Lele20g0618 197 Gene3D - 165 196 - -
Lele20g0618 197 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 168 187 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele20g0618 197 Gene3D - 18 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0618 Lele-ChrLele20 13471919 13475800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0618 32 197 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 77.711 3.08e-78 229