Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0611 ATGGCTTTTCACGACCATCTACCTCAAGAACTAGCTTTTCAGCCCTTCACGGATGAGCAACAGTTAAGTCAAAACAGGGACATGCAGAGGATGATGCCGTTCTCCGTGGCCGCAGCAGCACCCGGGGGAGGGCCGGCACCGACGTGGCTGCTGAATAGCGCGGGGTCCTCTCTCCGGCAGCAGAATTTCCTCCACTTGCAGTTGGACTCGGCCGATGATGTTCGTGGGAGTATGATGCCGTCGTCGGAGAGGAGCAACGATCGAGACGGCGGCGATCGGAGCCGGGGCAACGGAAATTGTGAATCTGAGGATTTGGCAGAGTACAAAGCTAACATTTTGGGACATCCCCTTTACGACCAGCTCTTGTCTGCTCACGTGTCGTGTTTAAGGATTGCCACTCCGGTGGACCAACTTCCTAGAATCGACGCCCAGCTTCAACAGTCACAGCGCGTGCTTGAAAAATACTCTGGTATTGGAAATGGTGTCGTTGATGAGAAGGACCTTGACCAGTTCATGACGCATTATGTTCTATTGCTATGTGCTTTCAAAGAACAACTCCAACAACATGTTCGAGTTCATGCCATGGAAGCTGTCATGGCTTGTTGGGAGCTTGAGCAATCTCTTCAGAGCTTGACTGGTGCGTCTCCGGGAGAAGGGACAGGAGCAACAATGTCGGACGATGAAGATGAGCAGGAAGAGAGCAATGCTAACCTCTACGAAGGTGGCCTTGATGCTGCTGACAGCCTCGGATTTGGTCCTCTCGTTCCCACTGAAACTGAAAGATCTTTGATGGAGCGTGTCAGACAGGAATTGAAGCATGAATTAAAGCAGGGTTACAAGGAGAAGATTGTGGATATACGAGAAGAGATTCTGAGAAAGAGGCGTGCCGGGAAGCTGCCCGGCGACACAACCTCGCTTTTGAAAGCTTGGTGGCAATCACATTCTAAATGGCCTTATCCTACTGAGAAAGCAGTAACCAGAGCTTTATGTGAGAAGGAGGGGGATGAATATATTATTGAACAGGCAAAACTATTGGGATTCATAGGATCCAAGATTTAA 1059 0.5014 MAFHDHLPQELAFQPFTDEQQLSQNRDMQRMMPFSVAAAAPGGGPAPTWLLNSAGSSLRQQNFLHLQLDSADDVRGSMMPSSERSNDRDGGDRSRGNGNCESEDLAEYKANILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVLEKYSGIGNGVVDEKDLDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGASPGEGTGATMSDDEDEQEESNANLYEGGLDAADSLGFGPLVPTETERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEKAVTRALCEKEGDEYIIEQAKLLGFIGSKI 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0611 352 MobiDBLite consensus disorder prediction 212 235 - -
Lele20g0611 352 MobiDBLite consensus disorder prediction 70 101 - -
Lele20g0611 352 Pfam KNOX1 domain 108 149 IPR005540 GO:0003677|GO:0005634
Lele20g0611 352 MobiDBLite consensus disorder prediction 85 101 - -
Lele20g0611 352 SMART ELK_2 270 291 IPR005539 GO:0003677
Lele20g0611 352 Pfam KNOX2 domain 163 212 IPR005541 GO:0003677|GO:0005634
Lele20g0611 352 SMART KNOX2_2 158 213 IPR005541 GO:0003677|GO:0005634
Lele20g0611 352 Pfam ELK domain 270 291 IPR005539 GO:0003677
Lele20g0611 352 SMART KNOX1_2 106 150 IPR005540 GO:0003677|GO:0005634
Lele20g0611 352 ProSiteProfiles ELK domain profile. 270 290 IPR005539 GO:0003677
Lele20g0611 352 Gene3D - 260 335 - -
Lele20g0611 352 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 108 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0611 Lele-ChrLele20 13432102 13435829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0611 1 343 Homeobox Transcription Factor Family AT5G25220 55.637 1.58e-137 395
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele20g0611 20 13432102 13435829 Lele20g0611 20 13432102 13435829 ECH
Lele17g0709 17 18856848 18860391 Lele20g0611 20 13432102 13435829 hybridization
Lele18g0812 18 5096088 5099762 Lele20g0611 20 13432102 13435829 hybridization