Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0603 ATGGAGATTTTTAAAAGTTTCTACTTCAATCTTCTTCTTGCCACTTTTTCTGTTTTCTTCTTCTTGGCTGTTTCCGCAATGGACCCTTATTCTGATGCACTCCTGAGCCTGAAATCTGAACTTGTTGACGATGAAGACAGTTTACGTGACTGGGTGGTGGTCAACTCAACTGGGAAATCCAATGCTTGTTGTTCTTGGTCTGGAATCAAGTGTGATAACGACTCAAAAACTGTAATCTCCATAGACTTGTCCATGAAGAAACGGGGAGGTGTAATTTCAGGGAAGCAATTCAGTGTCTTCACAAAGCTTGAATACCTCAACCTCAGCCACAATTTCTTCTCTGGGCAACTTCCTGTGGTCCTTAATCTTGCTGGGAGTTACTTCAAAGGACCAATACCATCTGAATATGGTTCCTTTAGAAGCCTTGAGTTTCTTCATCTTGCAGGAAATCTTCTCTCTGGGAATCTACCTCCAGAACTTGGGAATCTCAAAACAGTAACCCACATGGAAATTGGCTACAATTCTTACCAGGGTTTCATTCCATTTGAGTTAGGTAACATGAGTGAACTTGAGCATCTTGATATTGCTGATGCAAATCTATCTGGCCCGATACCAAAGCAACTATCCAATCTCACCAATTTACAGTCACTTTATCTGTTCAGAAACCAGCTCACAGGATCAATTCCGAGTGAGTTTAGTAAGATCAAGTCACTGGCAGATTTAGATGTTTCTGATAATCTCATTTCTGGGCCAATTCCTGAAAGCTTCTCAGAGTTGGAGAACCTGAGGCTGCTCAGTCTCATGTACAATGACATGAATGGCACTGTTCCTGAAGGAATTGCAGAACTTTCAAACTTAGAAGCTCTTCTTATTTGGAACAATTACTTCTCTGGGTCACTTCCACAGAGCTTGGGCAAGAACTCAAATCTCATCTGGGTGGATGTTTCCACAAACAATTTTGTAGGCAGTATACCACCAGACATTTGTTTGAGAGGAGTACTACATAAGCTGATTCTGTTTTCAAACAGATTATCAGGCAGCCTCTCACCATCTCTCTCAAATTGTTCTTCACTTGTTCGTCTTCGCTTGGAAGATAACTTGTTCACAGGGAATATCCCTCTGAAATTTAGACATCTTCCAGATATATCATATGTTGACCTATCCAGGAATAAATTTCTTGGTGGGATCCCCTCAGATATTTCCCAAGCTAACAAGCTTACTTATTTCAATGTCTCCAGTAATCCCCTATTAGGAGGCACCATCCCTGCACAAACATGGTCTTTGCCACTTCTGCAAAAATTTTCAGCCTCTTCCTGTGATATTTCAGGGAAACTTCCCTCATTTGAGTCCTGCAGATCAGTCTCTAGCATTGATCTTGACAGTAACAACTTGTTTGGAACAATCTCATTTACTGTTTCAAATTGCAAAAATCTTGAGACTATAAAATTATCCAACAATAATTTATCTGGTCCTATACCTGAGCAGCTTGCAAGCATCCATGTTCTTGGTGTTGTTGACCTATCACACAATAACTTCAGTGGCCTTATACCTGCAAAGTTTAGCACTTCTTCAAGCTTACAACTGCTTAATGTGTCTTTTAACTACATCTGTGGTTCAATTCCCAAAGGAAACTTGTTCCGATTCATGGATAACAGTGCATTTGTTGGGAATCCAGAGCTATTTGGAGAACCTCTTTGA 1698 0.4046 MEIFKSFYFNLLLATFSVFFFLAVSAMDPYSDALLSLKSELVDDEDSLRDWVVVNSTGKSNACCSWSGIKCDNDSKTVISIDLSMKKRGGVISGKQFSVFTKLEYLNLSHNFFSGQLPVVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNLLSGNLPPELGNLKTVTHMEIGYNSYQGFIPFELGNMSELEHLDIADANLSGPIPKQLSNLTNLQSLYLFRNQLTGSIPSEFSKIKSLADLDVSDNLISGPIPESFSELENLRLLSLMYNDMNGTVPEGIAELSNLEALLIWNNYFSGSLPQSLGKNSNLIWVDVSTNNFVGSIPPDICLRGVLHKLILFSNRLSGSLSPSLSNCSSLVRLRLEDNLFTGNIPLKFRHLPDISYVDLSRNKFLGGIPSDISQANKLTYFNVSSNPLLGGTIPAQTWSLPLLQKFSASSCDISGKLPSFESCRSVSSIDLDSNNLFGTISFTVSNCKNLETIKLSNNNLSGPIPEQLASIHVLGVVDLSHNNFSGLIPAKFSTSSSLQLLNVSFNYICGSIPKGNLFRFMDNSAFVGNPELFGEPL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0603 565 SUPERFAMILY RNI-like 228 543 - -
Lele20g0603 565 FunFam Leucine-rich repeat receptor-like protein kinase TDR 256 564 - -
Lele20g0603 565 PANTHER UNNAMED PRODUCT 11 560 - -
Lele20g0603 565 Pfam Leucine Rich Repeat 102 117 IPR001611 GO:0005515
Lele20g0603 565 FunFam Leucine-rich repeat receptor-like protein kinase TDR 133 237 - -
Lele20g0603 565 Pfam Leucine rich repeat 212 271 IPR001611 GO:0005515
Lele20g0603 565 Gene3D Ribonuclease Inhibitor 25 118 IPR032675 -
Lele20g0603 565 Gene3D Ribonuclease Inhibitor 231 327 IPR032675 -
Lele20g0603 565 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Lele20g0603 565 SUPERFAMILY L domain-like 33 325 - -
Lele20g0603 565 Gene3D Ribonuclease Inhibitor 119 230 IPR032675 -
Lele20g0603 565 Gene3D Ribonuclease Inhibitor 328 565 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0603 Lele-ChrLele20 13386180 13387989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0603 210 543 Receptor kinase-like Gene Family AT5G51350 30.973 1.08e-27 116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0702 17 18809172 18812274 Lele20g0603 20 13386180 13387989 hybridization
Lele18g0820 18 5139471 5142673 Lele20g0603 20 13386180 13387989 hybridization