Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0602 ATGAGACTGGGAAATGCAAGGCACAAGAATTTGATCAGATTACTGGGTTTTTGCTACAACCAGAATCTAGCTTATATTTTATATGACTACTTACCCGATGGGAACTTGGCAGAGAAAATTGGGACGAAAAGGGATTGGGCAGCTAAATTCAGAATTGTGATGGGCATTGCCAAGGGACTTTGCTTCCTTCACCATGACTGTTACCCAGCCATACCCCATGGAGACTTGAAGTCTAGCAATGTAGTATTTGATGAAAATATGGAACCCCACTTGGCAGAATTTGGCCCCAAGCATGTTTTGAAGTTGAGCAAAGGTTCATCTCCTACCACAACTTCTAGCTGGGAACAACCAGAATACAATGAAGCCATGAAAGAGGAATTCTACAGTGATGTCTACAAATTTGGAGAGATGATTCTGGAGATCTTAACTAATGGAAGGCTGACAAATGCAGCAGCTAGCATGCACAGCAAACCAAGAGATGTTCTTTTGAGAGAAATTTACGATGAAAATGATGATGTGGGTTCTGCAAGTTCACTGCAAGAGAGAAAACTGGTTCTTGAAGTTGCTTTGCTTTGCACCAGAAGCAAGTCATCGGATCGCCCATCCATGGAAGATGCCTTGAAGCTTTTGTCAGGGTCAAAGCCTCCAGAAGATTACAAATATTAA 666 0.4204 MRLGNARHKNLIRLLGFCYNQNLAYILYDYLPDGNLAEKIGTKRDWAAKFRIVMGIAKGLCFLHHDCYPAIPHGDLKSSNVVFDENMEPHLAEFGPKHVLKLSKGSSPTTTSSWEQPEYNEAMKEEFYSDVYKFGEMILEILTNGRLTNAAASMHSKPRDVLLREIYDENDDVGSASSLQERKLVLEVALLCTRSKSSDRPSMEDALKLLSGSKPPEDYKY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0602 221 Pfam Protein tyrosine and serine/threonine kinase 4 208 IPR001245 GO:0004672|GO:0006468
Lele20g0602 221 FunFam Leucine-rich repeat receptor-like protein kinase TDR 31 218 - -
Lele20g0602 221 Gene3D Transferase(Phosphotransferase) domain 1 34 217 - -
Lele20g0602 221 ProSiteProfiles Protein kinase domain profile. 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0602 221 SUPERFAMILY Protein kinase-like (PK-like) 3 211 IPR011009 -
Lele20g0602 221 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 211 - -
Lele20g0602 221 SMART tyrkin_6 3 210 IPR020635 GO:0004713|GO:0006468
Lele20g0602 221 ProSitePatterns Serine/Threonine protein kinases active-site signature. 71 83 IPR008271 GO:0004672|GO:0006468
Lele20g0602 221 Gene3D Phosphorylase Kinase; domain 1 2 33 - -
Lele20g0602 221 MobiDBLite consensus disorder prediction 196 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0602 Lele-ChrLele20 13384936 13385850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0602 2 211 Receptor kinase-like Gene Family AT5G51350 55.349 1.33e-68 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele20g0602 PK_Tyr_Ser-Thr 9.8e-20 CL0016