Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0597 ATGTTGGCCACTTCCAAAAGGTGTTCTCTACTGGAATGGATAAGGAGACTCGTCTTGCATGCTACTCGAGCTTCTCGGGTTGAAAATCAAGATGTTATTGATGCATCAATCGTAGGAATGTTGGGAGATCCCAAGGAGGTAAGAGCAGGAATCACTGAGGGTGCTCCAGAAAAGACCAAAGAAAGTGAAGGAGATCCATGGGAGTTCTTGGGCTTATTGCCTCTCTTTGATCCTCCAAGGCATGATAGTGCAGAGACTATTCGTCGTGCTCTTGAGCTCGGTGTTAATGTAAAGATGATCACTGGTGACCACCTTGTCACTGGAAAAGAAACCGGTCGTAGGCTTGGAGTGGTCACCAACATTTATCCATCTTCTTCACTCCTTGGTAATAGCAAGGATCCTTCCATTGCTGCCATCCCATTGGATGAACTCATCGAGAAGGCCGATGGATTTGCTGGAGTTTTCCCAGAACACAAGTATGAGATTGTGACGAGGTTGCAAGATAGGAATCACATTTGTGGAATGACTGGTGAGGACGTGAACGATGCGCCTACGCTTAAGAAGGCAGACATTGGTATTGCAGTGGCTGATGCAACAGATGCTGCTCGAGCCGCCTCGGACATTGTTTTTACAGAGCCAGGACTTAGTGTGATCTTTGACTTTTCTCCTTTCATGGTCTTGATCGTTGCCATCTTGAATGATGGAACCATCATGGCTATTTCAAAGGATAGGGTTAGACCATCCCCTTTACCTGATTCATGGAAGCTCAGAGAAATCTTTGCCACTGGTGTTGTTCTTGGAGCTTACATCGCCATTATGACTGTTGTCTTTTTCTACCTTGACAATTTTGGTGTCAAGCATATCACAGATAGTGAAGAACATCTTAACTCAGCACTTTGCCTTCAAGTGAGCATAATTAGTCAAGCACTCATATTTGTCACAAGATCAAGAGGTTGGTCACTCTCAGAACTCTCTTGTGTCATGCTTGTTGGAGGCTTCTTCGCTGCACAACTGGTGGCGAATCTCATCGTTGTGTATGCTAACTGGGAATTTGCCAAAATCCAAGGGATTGGTTGGAGATGGGCAGGAGTAATCTGGCTTTACAGTGTTATCACTTACATCCCTCTTGATCTTCTCAAGCTCATAATCCTTCCAGCATTGACTAACAAAGCCTGGCACACCATGATCCAAAACAAGGTCAACTTTTGCAGGTTAAGGGAGCTGCACACTAAGAAGGGACATGTTGAATCTGTGGCTAAGTTGAAGGGTCTTCTTGACATTGATACCACTAATCAGCACTGCAGAGTGTAA 1311 0.4493 MLATSKRCSLLEWIRRLVLHATRASRVENQDVIDASIVGMLGDPKEVRAGITEGAPEKTKESEGDPWEFLGLLPLFDPPRHDSAETIRRALELGVNVKMITGDHLVTGKETGRRLGVVTNIYPSSSLLGNSKDPSIAAIPLDELIEKADGFAGVFPEHKYEIVTRLQDRNHICGMTGEDVNDAPTLKKADIGIAVADATDAARAASDIVFTEPGLSVIFDFSPFMVLIVAILNDGTIMAISKDRVRPSPLPDSWKLREIFATGVVLGAYIAIMTVVFFYLDNFGVKHITDSEEHLNSALCLQVSIISQALIFVTRSRGWSLSELSCVMLVGGFFAAQLVANLIVVYANWEFAKIQGIGWRWAGVIWLYSVITYIPLDLLKLIILPALTNKAWHTMIQNKVNFCRLRELHTKKGHVESVAKLKGLLDIDTTNQHCRV 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0597 436 Gene3D - 398 435 - -
Lele20g0597 436 Gene3D - 55 76 IPR023299 GO:0000166
Lele20g0597 436 PANTHER CALCIUM-TRANSPORTING ATPASE 62 219 - -
Lele20g0597 436 Gene3D - 77 213 IPR023214 -
Lele20g0597 436 SUPERFAMILY Calcium ATPase, transmembrane domain M 219 384 IPR023298 -
Lele20g0597 436 SUPERFAMILY HAD-like 68 219 IPR036412 -
Lele20g0597 436 Pfam haloacid dehalogenase-like hydrolase 68 190 - -
Lele20g0597 436 FunFam Plasma membrane ATPase 70 223 - -
Lele20g0597 436 Gene3D - 220 355 - -
Lele20g0597 436 PRINTS P-type cation-transporting ATPase superfamily signature 71 82 - -
Lele20g0597 436 PRINTS P-type cation-transporting ATPase superfamily signature 93 103 - -
Lele20g0597 436 PRINTS P-type cation-transporting ATPase superfamily signature 176 195 - -
Lele20g0597 436 PRINTS P-type cation-transporting ATPase superfamily signature 199 211 - -
Lele20g0597 436 PRINTS H+-transporting ATPase (proton pump) signature 207 232 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0597 436 PRINTS H+-transporting ATPase (proton pump) signature 148 164 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0597 436 PRINTS H+-transporting ATPase (proton pump) signature 176 192 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0597 Lele-ChrLele20 13361037 13364697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0597 17 53 Primary Pumps ATPases AT3G42640 83.784 8.44e-12 65.5