Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0575 ATGTCATGCAAGGCATCGAGTGGTGTGGACAATGCGAGCATAGACGGTTTAGATCCAAATATCAGCTGTTATCCCGCCTATCCAAACAAACATTCAGGACACTGCAGCAAGGAATCGGTTAATAAATTCAAGGGCATTATGCCACAGCAGAATGGAAACTGGGTTTCTCAGATGTATGCTGATGGCCATCAGATGTGGCTCGGGACCGTCAAGTCTGTAAAGGAAGAAGAGATGGCTTATGATAGCGCGGCTATCCGACTTCGCTGTGGTGGTTCTCGCCAGAATTTTCCTTGGACTAATGTTATTGCTAAGGAGCCAAACTTCCAGAGCCAACAACATGGCCAAGAAGCTGTACTTGAGGTCATAAGTGGTGGTTCATGGCAACCAAGATTCCAAGGGTTTAATGGGGAGAATAATTATGGAAATACTGAATCGGGAATCTGTGGTCTCAACCTTTCTGCAATGGAGAAAAGGGGTGGCTTCTCATGCAAGCTACTTTTCCGAAAGATGCTGACACAGAGCGATGTGGGTAGGTTGAATAGACTTGTCATCCCCAAGAAACATGCCACCACATGTTTCTCCGAAATCTCTAGAAGAATGGAAGAATATGCAAAAGCTGGCATTCATGCTGATGAGCAGGTAGATTTCTTCGACAGGACGATGACGTCATGGAAGTTCACTGCTACTGGAAGAGCAGCCAAAGTTATGTGTTCACAAGAGGTTGGATCAAGAAACTATGCTAGTAGCAGCAGATCAGTGATTGAAGATGCTAATCGTCGCAATGTTGGGTTGAAATCTGAAATGGGGAGTTCAGTTTTTGAAGGTTGTTCTTATCATCATCACCACCACCATGTTGAGGTGAAATCTGAAGTGTGCTCTGATAATGATGAGAAGAGGCTTGGAAAGCGAGTGATGGTGAATGTTGACCCGCCAAGCAATGTTGAGAGGAAAGGTTTCAGGCTCTTTGGGGTTCAAATCAACTGA 984 0.4502 MSCKASSGVDNASIDGLDPNISCYPAYPNKHSGHCSKESVNKFKGIMPQQNGNWVSQMYADGHQMWLGTVKSVKEEEMAYDSAAIRLRCGGSRQNFPWTNVIAKEPNFQSQQHGQEAVLEVISGGSWQPRFQGFNGENNYGNTESGICGLNLSAMEKRGGFSCKLLFRKMLTQSDVGRLNRLVIPKKHATTCFSEISRRMEEYAKAGIHADEQVDFFDRTMTSWKFTATGRAAKVMCSQEVGSRNYASSSRSVIEDANRRNVGLKSEMGSSVFEGCSYHHHHHHVEVKSEVCSDNDEKRLGKRVMVNVDPPSNVERKGFRLFGVQIN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0575 327 Gene3D - 160 284 IPR015300 -
Lele20g0575 327 ProSiteProfiles AP2/ERF domain profile. 42 97 IPR001471 GO:0003700|GO:0006355
Lele20g0575 327 CDD AP2 42 99 IPR001471 GO:0003700|GO:0006355
Lele20g0575 327 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 41 227 IPR044800 GO:0003700
Lele20g0575 327 SMART rav1_2 42 103 IPR001471 GO:0003700|GO:0006355
Lele20g0575 327 SUPERFAMILY DNA-binding pseudobarrel domain 165 229 IPR015300 -
Lele20g0575 327 Gene3D AP2/ERF domain 41 98 IPR036955 GO:0003700|GO:0006355
Lele20g0575 327 SUPERFAMILY DNA-binding domain 42 98 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0575 Lele-ChrLele20 13228884 13229986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0575 40 226 RAV Transcription Factor Family AT1G51120 43.590 2.10e-41 145