Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0574 ATGGCGGAACAAGGCAAAGACAGTCACTCGGCTCTGCTCCATGGAAAGTACCAGCTGGGTCGGCTTCTGGGTCACGGAACATTCGCGAAGGTGTATCATGCTCGGAACTTGCAGACGGGGAAGAGCGTGGCGATGAAGGTGGTGTCGAAAGAGAAGGTGATAAAAGTGGGAATGATGGAGCAGATCAAGAGAGAAATCTCAGTGATGAACATGGTGAAGCATCCCAACATTGTCGAGCTTTACGAAGTCATGGCCAGCAAATCCAAGATTTACATCGCCATGGAGCTCGTTCGAGGTGGCGAGCTCTTCAATAAAATCGCTCGAGGTCGGTTGAGAGAAGACGTGGCCAGAGTCTATTTCCAGCAATTGATCTCCGCCATCGATTTCTGCCATAGCCGCGGCGTCTACCACCGGGACCTCAAGCCGGAGAATCTGCTCCTCGACGAGCATGGAAACCTCAAAGTCACAGATTTTGGTCTCAGCACTTTCTCCGAGCACTTACGGCAAGATGGTTTGTTGCATACTACATGTGGTACTCCGGCGTATGTGTCACCGGATGTAATCAGTAAAAAAGGCTACGACGGCGCAAAGTCGGATATTTGGTCTTGTGGTGTCATCTTATACGTCCTTCTCGCCGGATTTTTACCCTTTCAAGACGACAATTTGGTTTCTATGTACAAAAAGATTTACAGAGGCGACTTCAAATGCCCGCCGTGGTTTTCATCCGAAGCCCGACGACTCATCACGAAGCTCCTGGACACGAACCCGAACACTCGAATTACGATTTCAAAAATCATGGACTCATCGTTCTTCAAAAAACCGATTCCGAAGATCTTGAGGACGAAAACAGGGAAGGAATTTGAAGTGGAATGCGATGATAATTTTGAGAAATCGAAGCAGAATCAGCCCGCAACAATGAACGCGTTCCATTTGATATCTCTTTCAGAAGGGTTCGACTTGTCGCCGCTCTTCTCCGAGAAGAGGGAAGAGAAAGAGGAAATGAGGTTCGCGACGGCGAAGCCGGCGAGCAGTGTGATATCGAGGCTAGAGGAGGTGGCGAGGGCGGAGAAATTCAACGTGAAGAAGAGCGACACCATGTTGAGGCTGCAGAGGCAGGAGTGTGGACGGAAGGGGAGGCTGGCAATCGCGGCGGAGATATACCCAGTGACGCCGTCGCTGGCGGTGGTGGAGGTAAAGAAAGATAACGGCGATACCCTGGAGTACAACCAGTTCTGCAGCAAGGAGCTCCGACCCGCACTTAAAGACATTGCGTGGACATCACCGTCAGACAACCCCGACCCCGAATAA 1308 0.5084 MAEQGKDSHSALLHGKYQLGRLLGHGTFAKVYHARNLQTGKSVAMKVVSKEKVIKVGMMEQIKREISVMNMVKHPNIVELYEVMASKSKIYIAMELVRGGELFNKIARGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEHGNLKVTDFGLSTFSEHLRQDGLLHTTCGTPAYVSPDVISKKGYDGAKSDIWSCGVILYVLLAGFLPFQDDNLVSMYKKIYRGDFKCPPWFSSEARRLITKLLDTNPNTRITISKIMDSSFFKKPIPKILRTKTGKEFEVECDDNFEKSKQNQPATMNAFHLISLSEGFDLSPLFSEKREEKEEMRFATAKPASSVISRLEEVARAEKFNVKKSDTMLRLQRQECGRKGRLAIAAEIYPVTPSLAVVEVKKDNGDTLEYNQFCSKELRPALKDIAWTSPSDNPDPE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0574 435 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Lele20g0574 435 FunFam Non-specific serine/threonine protein kinase 301 425 - -
Lele20g0574 435 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0574 435 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0574 435 SUPERFAMILY Protein kinase-like (PK-like) 14 284 IPR011009 -
Lele20g0574 435 CDD CIPK_C 307 421 - -
Lele20g0574 435 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 422 - -
Lele20g0574 435 CDD STKc_SnRK3 16 270 - -
Lele20g0574 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Lele20g0574 435 Gene3D Kinase associated domain 1, KA1 300 426 - -
Lele20g0574 435 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0574 435 FunFam Non-specific serine/threonine protein kinase 11 308 - -
Lele20g0574 435 Gene3D Phosphorylase Kinase; domain 1 14 98 - -
Lele20g0574 435 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Lele20g0574 435 Pfam NAF domain 303 362 IPR004041 GO:0007165
Lele20g0574 435 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Lele20g0574 435 Gene3D Transferase(Phosphotransferase) domain 1 99 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0574 Lele-ChrLele20 13225717 13227024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0574 3 427 CBL-interacting serine-threonine protein kinases AT4G30960 73.684 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele20g0574 Pkinase 7.4e-74 CL0016