Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0569 ATGGGTTTTGGGGCATTTGGTTCCATTGTAGTTCTGACAATTTTCTTTGAGCATTTGGCTTGTCAGCAACCAAATACTGATGATTTCTTTGTGTCTGAGTTCTTGAAGAACATGGGTTTATCATCATCATCATCATCATCATTATCATCATCTTCTTCTTCTTCCTCAAAAGCCTTCAACTTCTCTGCTTCTGTTTGTTCATGGCCTGGTGTTTCCTGTGATGCAAATAAAGAACATGTTATTGAGTTGAAAGCTTCTGGTTTGGAACTCTCTGGACCTATTCCTGATAACACCATTAGCAAACTCAGCAAGCTACAAATTTTGGATCTTAGTAACAACAAAATCACGGCTTTGCCTTCTGATTTCTGGAGCTTAGGCTCTTTGAAGATTCTTAACCTCTCCTCCAATCAGATATCAGGTTCACTTGCCAGCAACTTTGGCAACTTTGGTCACCTCGAAACCTTTGACATGTCGAACAACCATTTTTCTGGGGAAATTCCTGAAGCTATTAGCTCCCTTGTGAGTTTAAGGATACTTAAACTTGACAAAAACAAGTTTGGGCAAAATATACCTTCTGGGATTCTACAGTGTCAGTCTCTAGTTTCTATTGATCTTTCACTAAATCAGCTTAATGGAACTTTTCCTGAAGGTTTTGGAGCTGCTTTTCCTAAACTTGAAATCTTGAACCTTGCAGGGAATAATCTTCATGGACATGACTCAGATTTTTCAGGGTTGAAATCCATTACTAGTATTAACATATCTGCAAATTCCTTTCAGGGTTCTTTTCTGGGTATGTTTCAGGAACAGTTGGAGGTAATTGACCTTAGCAGGAACCAGTTTGAGAGTCAGATTTCTCAGGTAAAGTTCAAGTACAATTGGTCTCATTTGGTTTATCTGGATTTGTCTGAGAATAGGCTTAGTGGGGAAATTTTCCAGTATCTGAATGAATCCCAGAATCTTAAACACCTTAATCTGGCACACAATAGGTTTGCAAGTCAGAAATTTCCCCAAATTGAAAACCTCTCAAGATTGGAATATCTGAACTTGTCCGAAGCTAATCTGCATGGCCACATTCGTGCAGAAATATCACAGCTGAGTAATTTGAATTCACTTGATCTTTCTTTGAATAATCTTGTTGGGGGAATTCCATTTCTAAGAAGTGAAAACCTCGAAGTTCTTGACCTTTCATACAACAATTTGAGTGGTGAAATCCCTCAACCTGTGTTGGAGAAGCTCCCATCGATGGAGAAATATAACTTCTCTTATAATAACTTAACCTTCTGTTCTTTGGGAATCAACCCCAATATCCTCAAAACAGCATTCTATGGCTCATCAGACAATTGCCCGATTGCAGCGAATCCGAAGCTTTTCAAAAGAACCGATGAACAACGAAGGGGGATGAAGCTAGCTCTGGCGTTGACCCTCTCAATGGTCTGCTTACTTTCTGGCCTTTTATTTCTAGCATTTGGTTGCAGAAGGAAAACAAAATCATGGGCAATTAAGCAAACTTCCTACAAAGAAGAGCAGAACATTTCGGGTCCCTTCTCGTTCCAGACTGATTCCACTACCTGGGTGGCTGATGTCAAGCAAGCAAACTCAGTCCCAGTAGTAATCTTTGAGAAGCCATTACTCAACATTACATTTGCAGATCTCTTGTACTCAACTTCGAATTTCGATAGGGGTAACCTCTTGGCTGAAGGCAAATTCGGGCCCGTTTACCGAGGTTTTCTGCCCAGTGGCATTCATGTTGCAGTTAAAGTTTTGGTTGTTGGGTCTACATTGACAGAACAAGAAGCTGCTAAAGAGCTCGAGTATCTTGGTCGAATAATGCACCCTAATCTTGTTCCTCTGAGTGGATATTGCTTTGCTGGGGATCAAAGGATTGCCATATATGATTACATGGAGAATGGGAACTTGCAAAACTTTCTTCATGACTTGCCACTTGGTGTACAGAAGACAGATCATTGGAGCACAGACACATGGGAAGAGGGAGATGACACGAACAATGGAATTCACAATGCTAGCTCTGAAGGATTATCACTCTCATCTTGGCGATTTCGACACAAAATCGCCCTTGGCACTGCTCGAGCATTGGCATTTCTTCACCATGGCTGCTCGCCTCCAATCATTCACAGAGACGTTAAAGCTAGCAGTGTCTACTTGGACTATAACTTGGAGCCAAGGTTATCAGATTTTGGGCTGGCCAAGATTTTTGGAAGCAGCTTGGATGAGGAGATTGCTCGAAGCTCTCCTGGCTATGTTCCGCCCGAGTTTTCTCAACCCGAATTTGACCTCCCAACACCAAAATCCGATGTTTACTGTTTCGGGGTTGTTCTCTTTGAGCTAATAACAGGGAAAAAACCAGTTGGGGATGATTATCCTGAAGAGAAAGAAGGGAACTTGGTAAGCTGGGTCAGAGGACTGGTAAGAAAGAACTTAGCTTCAAGAGCCATTGATCCAAAAATTAATGATAGAGGAATTGATGATCAAATTGAAGAAGCCCTTAAGATTGGTTATCTTTGTACTGCTGATCTTCCCTCTAAGAGACCTAGCATGCAGCAGATAGTGGGACTTTTGAAAGATATTGAGCCTGCTGCTGGGGAAAAATCATAA 2613 0.4126 MGFGAFGSIVVLTIFFEHLACQQPNTDDFFVSEFLKNMGLSSSSSSSLSSSSSSSSKAFNFSASVCSWPGVSCDANKEHVIELKASGLELSGPIPDNTISKLSKLQILDLSNNKITALPSDFWSLGSLKILNLSSNQISGSLASNFGNFGHLETFDMSNNHFSGEIPEAISSLVSLRILKLDKNKFGQNIPSGILQCQSLVSIDLSLNQLNGTFPEGFGAAFPKLEILNLAGNNLHGHDSDFSGLKSITSINISANSFQGSFLGMFQEQLEVIDLSRNQFESQISQVKFKYNWSHLVYLDLSENRLSGEIFQYLNESQNLKHLNLAHNRFASQKFPQIENLSRLEYLNLSEANLHGHIRAEISQLSNLNSLDLSLNNLVGGIPFLRSENLEVLDLSYNNLSGEIPQPVLEKLPSMEKYNFSYNNLTFCSLGINPNILKTAFYGSSDNCPIAANPKLFKRTDEQRRGMKLALALTLSMVCLLSGLLFLAFGCRRKTKSWAIKQTSYKEEQNISGPFSFQTDSTTWVADVKQANSVPVVIFEKPLLNITFADLLYSTSNFDRGNLLAEGKFGPVYRGFLPSGIHVAVKVLVVGSTLTEQEAAKELEYLGRIMHPNLVPLSGYCFAGDQRIAIYDYMENGNLQNFLHDLPLGVQKTDHWSTDTWEEGDDTNNGIHNASSEGLSLSSWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGSSLDEEIARSSPGYVPPEFSQPEFDLPTPKSDVYCFGVVLFELITGKKPVGDDYPEEKEGNLVSWVRGLVRKNLASRAIDPKINDRGIDDQIEEALKIGYLCTADLPSKRPSMQQIVGLLKDIEPAAGEKS 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0569 870 SMART LRR_typ_2 125 148 IPR003591 -
Lele20g0569 870 SMART LRR_typ_2 222 244 IPR003591 -
Lele20g0569 870 SMART LRR_typ_2 173 197 IPR003591 -
Lele20g0569 870 SMART LRR_typ_2 341 365 IPR003591 -
Lele20g0569 870 SMART LRR_typ_2 102 124 IPR003591 -
Lele20g0569 870 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Lele20g0569 870 ProSiteProfiles Protein kinase domain profile. 558 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0569 870 SUPERFAMILY L domain-like 52 434 - -
Lele20g0569 870 Gene3D Ribonuclease Inhibitor 386 456 IPR032675 -
Lele20g0569 870 Pfam Leucine Rich repeat 388 403 IPR001611 GO:0005515
Lele20g0569 870 Gene3D Ribonuclease Inhibitor 192 288 IPR032675 -
Lele20g0569 870 PRINTS Leucine-rich repeat signature 105 118 - -
Lele20g0569 870 PRINTS Leucine-rich repeat signature 365 378 - -
Lele20g0569 870 CDD STKc_IRAK 564 862 - -
Lele20g0569 870 FunFam Putative LRR receptor-like serine/threonine-protein kinase 519 633 - -
Lele20g0569 870 Gene3D Transferase(Phosphotransferase) domain 1 634 869 - -
Lele20g0569 870 Gene3D Ribonuclease Inhibitor 289 385 IPR032675 -
Lele20g0569 870 Gene3D Ribonuclease Inhibitor 35 191 IPR032675 -
Lele20g0569 870 SUPERFAMILY Protein kinase-like (PK-like) 534 859 IPR011009 -
Lele20g0569 870 SMART serkin_6 558 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0569 870 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 119 214 - -
Lele20g0569 870 FunFam Calmodulin-binding receptor kinase CaMRLK 268 384 - -
Lele20g0569 870 Gene3D Phosphorylase Kinase; domain 1 518 633 - -
Lele20g0569 870 SMART LRR_sd22_2 317 343 - -
Lele20g0569 870 SMART LRR_sd22_2 365 392 - -
Lele20g0569 870 SMART LRR_sd22_2 293 316 - -
Lele20g0569 870 SMART LRR_sd22_2 102 135 - -
Lele20g0569 870 Pfam Protein tyrosine and serine/threonine kinase 561 857 IPR001245 GO:0004672|GO:0006468
Lele20g0569 870 Pfam Leucine rich repeat 199 257 IPR001611 GO:0005515
Lele20g0569 870 Pfam Leucine rich repeat 94 138 IPR001611 GO:0005515
Lele20g0569 870 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 269 427 - -
Lele20g0569 870 ProSiteProfiles Leucine-rich repeat profile. 389 413 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0569 Lele-ChrLele20 13183722 13186334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0569 82 862 Receptor kinase-like Gene Family AT5G07280 32.491 4.06e-109 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lele20g0569 PK_Tyr_Ser-Thr 9.3e-32 CL0016