Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0567 ATGCCGCTTCACAGTCACACATCGGACCCTATAAAAAGGCTTTCCTCTCTCTTCCGAGCCATCCCTTTTACGGCCATGCCTGAGCATCTTGCTCTCCGGCCTCCTCCAATTCCACCCCTTGATCGCCGCCCTGTTGAACCAGAGGATAAACGAGTAGGTCGTGATAAAAATGAAGGACAACATGATGAAGATGATGACGACGGTGATGCGGAGAAGAAGCACAGGAAACGAGTCTGTGAAGAACCGTCTAGCGAGCTACGGAATTGTAAACCTTCGGATGAGGAGGCAGAGCCGCGAGAATCTACTTCTGAAACCCTAGTTACGCCCTCTTCGGTTGAGTCGGTGGTGGCTAGTAAGAGTGCTGATTTACAGGCTAGCTCTACTACGCGGACTGATGGCAGAGATGAAAGTGAGGAGCCAAATGGACCTTCAAACATGGAAATTGTTGTAAGAGAAACAATCCAGGGAGCTCAGAATCAGACAGAAGATCTACTTGAGGTTTCTGTGCGTCCAACTACGTTGTCTGTCGTATTGCCATCTTCTGTTGCGCAATCTTTATCATCTGTTCCTAGTTCAACTGTACCAGAGCAAAGGCTATCTCCTCAGAATGTTAATAATTTGCATGTGCTGGGAGCAGGCAAGAAAAAATTTTCTGGTGGTAAGCCTTTATCTGTTGTTAATGTTGCTAGGGCATTTGCATCTGATGGATACAACTGGCGTAAGTATGGTCAGAAGCAAGTGAAGAGTCCAACCGGTTTTCGAAGCTATTACAGGTGTACTCATTCAGGGTGTAATGCAAAGAAGATTGAATTTTGCGATCAATCAGGGCATATGATAGAGATTATTTATAAAGGTCAACACAGCCATGAGCCACTACGGAAGACTAACACCACTGGGGAAATTAAGTTCATGCCATCTGATGAACCTACTACTGTAGAAGCCAATCTTCCAGAAAAGCCCATTGGAGTGCTCAAGGATGCAGATCAAACCTCTTATACAAAAGAACCTGTACAAGATTTACCGTGCAGCGCTGATAAGAAACGGCAAAATTCATCTGGTCTTAGTGAGAATGGTGAAGTTATTTTGAAGGTGGAGCATGTTGATGAACCAGAGTTGAAAAGAAGAGTGAAGCATGGTGACTTAACAAACTTGGACTCGCATGTGGAACCTGGAAAGGAATCTAAGTATGTTGTACAGGCAGCAGGGGATGTCGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGGCAGAAAATGGTCAGGGGAAATTCCCTTCCCAGAAATTACTACCGATGCACATCTGCTGGATGTCCTGTCCGTAAGCAAATTGAGGCTGCAGTAGATGATCCTAATGCCGTCATCATTACATATAAAGGAGCACATAACCATGACAAGCCTGTGCCCAGAAAACGACATGGCCCACCGAGTGCTCCTCCTGTGCCTGCTACTGCCCCTGCCTCGTCAAACAATTTTCAACTCGTGAGTATTGATTCACAGCAAAACCGAGAAAATTCTGCTCAGTGGTCGGCGGACTCTGAAGAAGAATTAACTGAAGACGCCTCTGACCTTGGGGGTGAGAAAGCAATCGAGTTAGCTAGAACTCTTTTAAGCATGGGTGAAATTAAGTCTTGCTGA 1638 0.4585 MPLHSHTSDPIKRLSSLFRAIPFTAMPEHLALRPPPIPPLDRRPVEPEDKRVGRDKNEGQHDEDDDDGDAEKKHRKRVCEEPSSELRNCKPSDEEAEPRESTSETLVTPSSVESVVASKSADLQASSTTRTDGRDESEEPNGPSNMEIVVRETIQGAQNQTEDLLEVSVRPTTLSVVLPSSVAQSLSSVPSSTVPEQRLSPQNVNNLHVLGAGKKKFSGGKPLSVVNVARAFASDGYNWRKYGQKQVKSPTGFRSYYRCTHSGCNAKKIEFCDQSGHMIEIIYKGQHSHEPLRKTNTTGEIKFMPSDEPTTVEANLPEKPIGVLKDADQTSYTKEPVQDLPCSADKKRQNSSGLSENGEVILKVEHVDEPELKRRVKHGDLTNLDSHVEPGKESKYVVQAAGDVGISGDGYRWRKYGQKMVRGNSLPRNYYRCTSAGCPVRKQIEAAVDDPNAVIITYKGAHNHDKPVPRKRHGPPSAPPVPATAPASSNNFQLVSIDSQQNRENSAQWSADSEEELTEDASDLGGEKAIELARTLLSMGEIKSC 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0567 545 MobiDBLite consensus disorder prediction 460 524 - -
Lele20g0567 545 FunFam WRKY transcription factor 393 468 - -
Lele20g0567 545 Gene3D WRKY domain 225 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele20g0567 545 Gene3D WRKY domain 391 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele20g0567 545 MobiDBLite consensus disorder prediction 299 355 - -
Lele20g0567 545 MobiDBLite consensus disorder prediction 29 146 - -
Lele20g0567 545 ProSiteProfiles WRKY domain profile. 402 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g0567 545 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 51 268 IPR044810 GO:0003700
Lele20g0567 545 ProSiteProfiles WRKY domain profile. 228 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g0567 545 MobiDBLite consensus disorder prediction 42 101 - -
Lele20g0567 545 SUPERFAMILY WRKY DNA-binding domain 403 467 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele20g0567 545 MobiDBLite consensus disorder prediction 484 512 - -
Lele20g0567 545 SMART WRKY_cls 407 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g0567 545 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g0567 545 Pfam WRKY DNA -binding domain 235 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g0567 545 Pfam WRKY DNA -binding domain 409 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g0567 545 MobiDBLite consensus disorder prediction 102 128 - -
Lele20g0567 545 SUPERFAMILY WRKY DNA-binding domain 230 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0567 Lele-ChrLele20 13169693 13173004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0567 147 545 WRKY Transcription Factor Family AT4G30935 45.940 1.21e-103 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele20g0567 WRKY 9e-24 CL0274