Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0561 ATGGAAGGTTATAGTGCCTGGCAGAATAGAAGCAAAGATATTTTTAATTCACAGGGTTCTGTGGATACTGAAAATTCTCCTTTTGATTATGGAATTTTTACCCAAGCATTTCCATCTGGGATTGTTTCATCTGAAACGCTCATCTCTAAATACTGCAACTGTTTATGGTGGGGGCTCCAGAACTTGAGAACAGGGGATGCATCATCGCTTGCTCCCCATGAGCGTAGGGAACGTGTTAGACGCTATCATCAATATAAGAGGTTGGCACGTGGCATAGACGAAGAAAGCTTGGTGCAGAATCTACCGAAGGATCTTCAAAGAGATATTAAGAGTCATCTTTGTCTGGTTTTAGTCAGAAGGGTTCCACTATTTGAGAGTATGGATGTGAGATTACTTGATGCAATTTGTGAGAGACTGAAACCATGTTTATTTACAGAGAATACTTACATTGTTCGTGAAGGAGATCCGGTTGATGAGATGCTTTTCATCATCCGTGGTCTCCTTGAAAGTGTTACCCCCGATGCTGGGAGAAGTGAATATTTTAACCGCACTTTCCTAAAAGAGACAGACTTCTGCAGCGAGGAGCTTTTGACTTGGGCATTGGATCCCAAGTCAGGTTCTAACCTTCCATATTCTACTAGAACAGTCAAGACACTTGCAGAGGTTGAGGCTTTTGCATGGATTTCTGAAGATTTGAAGTTTGTTGCAAGTCAATTTAGGCGCCTCCATAGTAGGCAGGTTCAACATACCTTCCGGTTTTACTCACAACAATGGAGAAATTGGGCTGCTTGCTTTATTCACGCAGCGTGGCTTTGTTATTGCAAGAGGAAGATTATGGAGCTTCGTCGAAAAGAAGAATCATCCGAGGAATCAAAAGGAGGAGCTCGCAACAATGCTGCTGCTGGTGGTGGTCCATACAGCATTGGTGCCACCTTCTTAGCCTCAAGATTTGCAGCCAATGCTCTTCGAGATGTAGTTTTGAGGCTTGCAAGAGGGTTTTTGAACTTCAATACCAAACGTTCAGTAAATAAATATAGCACACTCATTCCATTACTTGCCTCTTATGACATTAGGCTACAAGTTATTGGTTAA 1092 0.4231 MEGYSAWQNRSKDIFNSQGSVDTENSPFDYGIFTQAFPSGIVSSETLISKYCNCLWWGLQNLRTGDASSLAPHERRERVRRYHQYKRLARGIDEESLVQNLPKDLQRDIKSHLCLVLVRRVPLFESMDVRLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGLLESVTPDAGRSEYFNRTFLKETDFCSEELLTWALDPKSGSNLPYSTRTVKTLAEVEAFAWISEDLKFVASQFRRLHSRQVQHTFRFYSQQWRNWAACFIHAAWLCYCKRKIMELRRKEESSEESKGGARNNAAAGGGPYSIGATFLASRFAANALRDVVLRLARGFLNFNTKRSVNKYSTLIPLLASYDIRLQVIG 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0561 363 Gene3D Jelly Rolls 121 241 IPR014710 -
Lele20g0561 363 CDD CAP_ED 123 254 IPR000595 -
Lele20g0561 363 SMART cnmp_10 123 254 IPR000595 -
Lele20g0561 363 SUPERFAMILY cAMP-binding domain-like 72 240 IPR018490 -
Lele20g0561 363 FunFam Cyclic nucleotide-gated ion channel 1 121 239 - -
Lele20g0561 363 Gene3D Helix hairpin bin 69 114 - -
Lele20g0561 363 ProSiteProfiles cAMP/cGMP binding motif profile. 123 207 IPR000595 -
Lele20g0561 363 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 17 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0561 Lele-ChrLele20 13140827 13142620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0561 1 325 Ion Channels AT2G23980 56.589 1.68e-129 386