Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele20g0560 | ATGGCAATCAGAGTTAGCACTCTGAGGACAGTCATCAATGCTTTCTACCTTACACGTATGGCTCTCCAATTTCATACGTCTTACATAGCTCCATCACCTCGTGTCTTTGGACGAGGCGAACTCGTTATAGATCCATCACAAATAGCCAAGCGATACTTCATTATCGATTTCCTTTCAGTGTTGCCCTTGCCACAGAGGTCAAAAAATTCAGATGTATTGGCAACAAAGGAGGCCTTACTGTTCATTATATTGCTTCAATATGTTCCTAGATTGCTTCGGATGGTACCGTTGACTTCAGAACTTAAGAGAACAGCAGGTGTCTTCGCTGAAACTGCATGGCCGGAGCTGCCTATTATTTGCTATTATACATGCTAG | 375 | 0.4293 | MAIRVSTLRTVINAFYLTRMALQFHTSYIAPSPRVFGRGELVIDPSQIAKRYFIIDFLSVLPLPQRSKNSDVLATKEALLFIILLQYVPRLLRMVPLTSELKRTAGVFAETAWPELPIICYYTC | 124 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele20g0560 | 124 | Pfam | Ion transport protein | 7 | 106 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
| Lele20g0560 | 124 | SUPERFAMILY | Voltage-gated potassium channels | 5 | 120 | - | - | |
| Lele20g0560 | 124 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 1 | 114 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele20g0560 | Lele-ChrLele20 | 13139997 | 13140520 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele20g0560 | 1 | 113 | Ion Channels | AT5G57940 | 72.000 | 4.04e-52 | 172 |