Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0558 ATGGAGGCCGAGGCTCGGGCTGAGGATTTGAAGAAGTCAAATCCCGTTTCTAGGGCATTAGTTAACAGCAAGAAGCAAGGTCAGGGTCAGAAGAATGGATCTGAAGGGGGGAATAAGAAGAGTGAAGGTGCTTTGAAAAGTGATGGTGGAGATGGTAATAATATCAAAGGCCGTAAGATGGAGAATGGGCGCTCCAATGACCATATTGTTGCTACTAAAGAATCTAACTTGGGTAGCAATATTAACGGTAAAGAGAATGCAAGTTCCAATAATGGAGCTTTTGATGTAAATAAGCTTCATAAGCTTAGGGTGAAAGGAGGAAAGAAGACAGATACTGTTACCAAAGCCTCCAAAGTAGAGCCAAAGAAAAAGCCGATGAAGAAAAATAGAGTTTGGGACGATTCACCTCCTGAAACAAAACTGGACTTTACAGATCCTGTGGGTGAGAATGGAGAAAGTAACATAGAAGTTGTGGCTGCTGATCATGGTGAAAGTATGATGGATAAAGAAGAGATTCTTAGTAGTGATAGTGAGGAAGAAGATGACGATGTGGAGATGAACAACAAACCTGATGCTAAAAAGAAGGGATGGTTTTCATCCATGTTCCAGAGTATTGCAGGAAAGGCTAACTTGGAGAAGTCAGACCTGGAACCAGCTTTGAAAGCTCTGAAGGACAGGCTCATGACCAAGAATGTGGCAGAAGAGATAGCTGAGAAACTCTGTGAATCAGTGGCAGCAAGTCTTGAAGGCAAAAAGCTAGCTTCATTTACAAGGATATCTTCAACAGTGCATGCCGCAATGGAAGAAGCACTTGTTCGAATTTTAACTCCTAAGCGTTCTATTGACATACTAAGGGATGTGCATGCTGCCAAGGAGCAAAGGAAACCATATGTTGTGGTATTTGTTGGTGTCAATGGAGTTGGAAAATCTACTAATCTAGCTAAGGTTGCTTACTGGCTTCTTCAGCATAACGTTAGTGTCATGATGGCTGCTTGTGACACATTTCGATCCGGTGCTGTTGAGCAGCTGCGGACTCATGCACGTAGACTTCAGATCCCTATATTTGAGAAGGGCTATGAGAAAGATCCTGCTGTTGTGGCAAAAGAAGCAATTCAGGAAGCTTCACGCAATGGTTCAGATGTGGTCCTTGTAGATACCGCTGGTCGTATGCAGGATAACGAGCCGCTGATGAGAGCATTGTCAAAGCTTATATACCTTAACAATCCAGACTTGGTCTTATTTGTGGGAGAAGCACTGGTTGGAAATGACGCAGTTGATCAGCTTTCAAAGTTCAATCAGAAATTAGCCGACTTATCTGCAACTGCTAATCCTAGATTAATAGATGGGATTTTGCTCACAAAGTTTGACACCATTGATGATAAGGTGGGAGCTGCACTTTCAATGGTTTACATATCAGGAGCTCCAGTGATGTTTGTGGGCTGCGGACAGTCAGGGGAAGATTATAAAAATCCGATATCGAAATACAATGACGGAGATACCAAAGTAGAGTTGAATCGCGCTGGTTCATTCTACTTCATTAGTGGAGCAGATGGTCATTGGCAGCAGGGCTTAAGGCTGGATCTGGTGGTTCGCTCTGGTGGGCACGGCGGAAGAGGTCATGATCAGTCTCATTCGCCTTCGCCGTCTCCGTCACCAGCACCAGCGCCGGCTCCGGCTCCTACACCGGTGACTTCTCTGGCTCCAGCACCGGCACCAACAAAGAATGGCGGCGATGCTTTAGGCAGTGGTGGATTCGTTGGCCTTGTGTTTGGGCGTTACGTTGTTGGTTATGATGATATGATAGTAAACATGGTGGGAACAAAATCTGTGAATAAGGGGCCTTCTTCTTCTTCACCATCGTCTTCGTCTTCGTCTTCCTCAGGACGACAACATTCGACAGAGGTACTAAGCCAACGTAGGAAGCTGCCTGTGTGTCCCATGAGAATGGCCATTGGTGGATTTGCTGCAACACTTGTGCTGGGTTACGTGGTCTTGTACTCCAACAAGAAGCCGGAGGCTTCCGCCATGGATGTCGCCAAGGTCACCACCGGAATGTCCAATCCAGACAACACCCATCCTCCTAAATAG 2088 0.4559 MEAEARAEDLKKSNPVSRALVNSKKQGQGQKNGSEGGNKKSEGALKSDGGDGNNIKGRKMENGRSNDHIVATKESNLGSNINGKENASSNNGAFDVNKLHKLRVKGGKKTDTVTKASKVEPKKKPMKKNRVWDDSPPETKLDFTDPVGENGESNIEVVAADHGESMMDKEEILSSDSEEEDDDVEMNNKPDAKKKGWFSSMFQSIAGKANLEKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVHAAMEEALVRILTPKRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHNVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSATANPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSGEDYKNPISKYNDGDTKVELNRAGSFYFISGADGHWQQGLRLDLVVRSGGHGGRGHDQSHSPSPSPSPAPAPAPAPTPVTSLAPAPAPTKNGGDALGSGGFVGLVFGRYVVGYDDMIVNMVGTKSVNKGPSSSSPSSSSSSSSGRQHSTEVLSQRRKLPVCPMRMAIGGFAATLVLGYVVLYSNKKPEASAMDVAKVTTGMSNPDNTHPPK 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0558 695 MobiDBLite consensus disorder prediction 16 37 - -
Lele20g0558 695 MobiDBLite consensus disorder prediction 69 95 - -
Lele20g0558 695 SMART SRP54_3 296 498 IPR000897 GO:0005525|GO:0006614
Lele20g0558 695 MobiDBLite consensus disorder prediction 98 140 - -
Lele20g0558 695 Pfam Plastocyanin-like domain 487 523 IPR003245 GO:0009055
Lele20g0558 695 SMART AAA_5 295 435 IPR003593 -
Lele20g0558 695 MobiDBLite consensus disorder prediction 531 575 - -
Lele20g0558 695 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 196 277 IPR036225 -
Lele20g0558 695 Pfam SRP54-type protein, helical bundle domain 198 267 IPR013822 GO:0005525|GO:0006614
Lele20g0558 695 MobiDBLite consensus disorder prediction 609 633 - -
Lele20g0558 695 MobiDBLite consensus disorder prediction 547 567 - -
Lele20g0558 695 Pfam SRP54-type protein, GTPase domain 297 489 IPR000897 GO:0005525|GO:0006614
Lele20g0558 695 Gene3D - 280 494 IPR027417 -
Lele20g0558 695 MobiDBLite consensus disorder prediction 41 68 - -
Lele20g0558 695 MobiDBLite consensus disorder prediction 609 639 - -
Lele20g0558 695 Gene3D - 166 278 IPR042101 -
Lele20g0558 695 FunFam Signal recognition particle receptor subunit alpha 166 278 - -
Lele20g0558 695 CDD SRalpha_C 309 490 - -
Lele20g0558 695 MobiDBLite consensus disorder prediction 1 150 - -
Lele20g0558 695 MobiDBLite consensus disorder prediction 168 192 - -
Lele20g0558 695 Pfam Signal recognition particle, alpha subunit, N-terminal 2 180 IPR007222 GO:0003924|GO:0005047|GO:0005525|GO:0005785|GO:0006886
Lele20g0558 695 FunFam signal recognition particle receptor subunit alpha 280 494 - -
Lele20g0558 695 SUPERFAMILY Cupredoxins 487 530 IPR008972 -
Lele20g0558 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 293 489 IPR027417 -
Lele20g0558 695 SMART SRP54_N_2 193 275 IPR013822 GO:0005525|GO:0006614
Lele20g0558 695 PANTHER SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA 91 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0558 Lele-ChrLele20 13130253 13137933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0558 490 558 Phytocyanin Superfamily AT2G25060 51.351 1.74e-14 70.5