Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0557 ATGGGATATGAAAGCAAAGACTGTATCTTGTTTCTGTGGTTTCTGCTATTGGCTTCTTCTTGTTCATCATGGTCTCTGGAGGAAGATCGGATAAAGGAGTTGCCCGGGCAGCCGCCAGTGGGGTTCAGTCAATTTTCCGGCTACGTCAGGGTGAACCGGCGTCATGGACGAGCTTTGTTCTACTGGCTCACTGAGGCTATCTCTTCTCCTCACAATAAGCCTCTTGTTCTCTGGCTTAATGGAGGGCCTGGTTGTTCATCTGTAGCATATGGGGCATCAGAGGAAATTGGTCCATTTCGGATAAACAAAACTGGTTCTTCTTTATATCCTAACAAATATGCATGGAACAGAGAAGCAAATATCCTTTTTCTTGAATCGCCTGCTGGTGTTGGTTTCTCCTACACAAATACAAGCTCCGACCTCAAAACTACTGGGGACAAAAGGACAGCTCAAGATGCACTGATTTTTCTAATTAGATGGATGTCAAGGTTTCCACACTATAAATACAGGGAGTTTTACATTGCTGGAGAGAGCTATGCAGGGCATTACATTCCCCAGTTGGCTAAGCAAATCTATGATTATAATAAAGCCCATCCACATATCATTAATCTAAAAGGGTTCATTGTGGGAAATGCTTTGACTGATGACTACTATGATGGGATTGGAACTATTACATATTGGTGGAGCCATGCAATGATATCTGATCTCTCGTACCATTCAATCCTCAAATACTGCAATTTCACATCAGAAAAGACTTCCAAAAAATGTGATGATTTAGTGAGTTATGCAGTTAACTATGAATTTGGACACATTGATACATACAGTATTTATACCCCACTATGCCCAACTTGGCATAACAATACCTTAAGGTATATACGGTTCAAGAATACAATTTTACATAGGATTTCAGGGTATGATCCATGTACTGAAGATCGTGCAGAAAAGTATTATAACCTTCCTCAAGTGCAGCAAGCAATGCATGCAAATGTTACAAGCATCCCTTACAAATGGACTGCTTGCAGTAATGTGCTCCTAAGAAATTGGAAGGATTCTCCAGTTTCTATATTGCCAATATACAGAGAGTTGATTGAGGCTAGTTTAAGAATATGGGTTTTCAGCGGGGACACAGATTCTGTGGTTCCAGTAACAGCCACTAGGTTTTCCCTCAACCATCTTAACCTCACCGTTAAAACTCGTTGGTATCCATGGTACTCAGGTGGACAGGTAGGGGGATGGACAGAGGTGTATGAAGGGCTCACATTTGCCACAGTGAGAGGAGCTGGACATGAAGTACCGTTATTTCAGCCTAAGCGAGCGTTCACACTCTTCAAATCTTTCTTAGCAGGCAAGGAGCTACCAGAATCTTAA 1368 0.4196 MGYESKDCILFLWFLLLASSCSSWSLEEDRIKELPGQPPVGFSQFSGYVRVNRRHGRALFYWLTEAISSPHNKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYPNKYAWNREANILFLESPAGVGFSYTNTSSDLKTTGDKRTAQDALIFLIRWMSRFPHYKYREFYIAGESYAGHYIPQLAKQIYDYNKAHPHIINLKGFIVGNALTDDYYDGIGTITYWWSHAMISDLSYHSILKYCNFTSEKTSKKCDDLVSYAVNYEFGHIDTYSIYTPLCPTWHNNTLRYIRFKNTILHRISGYDPCTEDRAEKYYNLPQVQQAMHANVTSIPYKWTACSNVLLRNWKDSPVSILPIYRELIEASLRIWVFSGDTDSVVPVTATRFSLNHLNLTVKTRWYPWYSGGQVGGWTEVYEGLTFATVRGAGHEVPLFQPKRAFTLFKSFLAGKELPES 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0557 455 Gene3D alpha/beta hydrolase 25 283 IPR029058 -
Lele20g0557 455 SUPERFAMILY alpha/beta-Hydrolases 28 452 IPR029058 -
Lele20g0557 455 FunFam Carboxypeptidase 25 283 - -
Lele20g0557 455 Pfam Serine carboxypeptidase 36 448 IPR001563 GO:0004185|GO:0006508
Lele20g0557 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Lele20g0557 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Lele20g0557 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 419 432 IPR001563 GO:0004185|GO:0006508
Lele20g0557 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Lele20g0557 455 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lele20g0557 455 ProSitePatterns Serine carboxypeptidases, histidine active site. 419 436 IPR033124 GO:0004185
Lele20g0557 455 Gene3D - 308 345 - -
Lele20g0557 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 436 IPR001563 GO:0004185|GO:0006508
Lele20g0557 455 FunFam Carboxypeptidase 355 449 - -
Lele20g0557 455 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Lele20g0557 455 Gene3D - 355 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0557 Lele-ChrLele20 13117718 13125440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0557 313 452 Calmodulin-binding Proteins AT2G22960 29.078 3.10e-14 69.3