Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0551 ATGCAGCAAGGTGATCAGACGGTGATTAGCTTGAGGCCTGGTGGTGGTCGTCCCGGCGGCGGTAGCAGGTTCCTTGCTCCTCGACTCGACTCATCCTCATCGGCTTCCTCTACTCCTGCTTTTGGTTCCTTTGCCTCTGATCCTTCTCGTCCCCATGGCGGTGCTCTTCATTCTTTTTCTATCAGGGCTGGAGATTCACAGTTTGAGGGTCGTGAGCGATACACTAGGGATCAACTTTTACAACTGAGGGAGGTTGGTGAGATTCCTGAAGATATTTTAAAAATTAAACGAGATATAGAAACTGAACTTTTTGGCGAAGATCAAAGCTGGGGCCGTGGAGAAAATCCTGCACAACAATTTCAAAATCGACACTCTGAGCCAGACAACCGTGATTGGCGTGGCCGGTCTGGGCAACTTCCTGCTTCTGCAGAAGAGAAGTCATGGGAGAATCTGAGTGAGAATAGAGAGTTTGGAAATTGGTTTGACTCAAGGCGGCAGGATCAACTGAATTCCCAGTTTGCAAGGGCAAATATTTCTTCTAATCAAGGAGGACCTGCTCCAACTTTAGTCAAGGCTGAGGTTCCATGGTCAGCTAGAAGAGGAAACCTATCTGAAAAGGATCGTGTCTTGAAAACCGTTAAAGGAATTCTAAACAAGCTTACCCCTGAGAAATTTGATGTCCTGAAGGGTCAATTGATTGATTCTGGAATTACATCTGCTGACATCTTGAAGGAAGTCATTTCACTGATATTTGATACGGCTGTACTAGAACCAACATTTTGCCCCATGTATGCCCTTCTTTGTTCAGATCTTAATGAAAAGATGCCTCCTTTCCCGTCTGATGAGCCTGGTGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAATAACTGTCAGGAGGCTTTTGAAGGCGCTGATAAACTGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCGTAAGGATAAGGAAAAACTGGTCAAGCTTCGTACTCTTGGAAACATCCGACTAATTGGGGAGCTGTTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAACTTTTGGGACCTCCTGATAGCAAGTCCTGTCCAGTTGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGTAAACAACTTGACGAAAGCCAAAAATCAAGGCGTATTAATGACATGTACTTTAGCCAATTGAAAGAGCTGAGCTCAAACCCCAAACTTGTATCACGGTTGAGGTTCATGATTCGTGATGTTCTAGATTTACGTGCTAATAACTGGGTTCCAAGACGGGAAGAGGTAAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAAAAGAATCTTGGATTGCGGCCAGGCGCTACCGCAAGCATTAGAAATAACCGTGCTGGAGGTTCTGGTCCTCAAGGAAATATGAGCCCTGGTGGATTTCCAGTTGCTCGACCTGGTACAGGAGGCATGATGCCTGGAATGCCAGGAACCAGGAAGATGCCTGGGATGTCTGGAATTGATAATGACAACTGGGAAATGCCTAGGAGATCAATGCCAAGAGGAGACATGTTGGGTATGCAAGCTGCAGGACGTGGCCAGTCTCCTTTACTTGCGAAGTCATCAGCCCTGAACTCAAAGCTATTACCTCAAGGTAGCGGTGGTGTCATAAGTGGAAGAAGCAGTGCCCTATTGCATGGTGGTGGCGCTCCTCCTTCTCGTCCATCAAACTTTGTTTCTGCTGCTGAACTTGCATCTCAAGTCCCTACATCTACGAAAGGTGCCCCTCCTAGTGGTTTTGTTGAGAAGCCACAAGCTCCAGCTCCAAAATTAAATTTGGATGATCTTCGCAGCAGAACTGTCTTTCTTCTGGAAGAATATTTCAGTGTTCGTCTTCTAGACGAGGCATTGCAGTGTGTGGAAGAACTAAAGGCTCCATCCTACCACCCTGAGTTCGTTAAGGAGGCTATTTCCCTTGCACTAGATAAAAGTCCACCCTGTGTTGATATCGTGGGCAATCTTCTTGAGTATCTTTTTATTAAGAAGATTCTTACTGCTAGAGATATAGGGAATGGCTGTTTGTTGTTTGGTTCCATGCTAGACGACATGGGAATAGATTTACCTAAAGCACCAAATAACTTTGGTGAGATAATTGGGAAGCTAATTTTGGCTGGGGGATTGGATTTTAAGGTCTTGACAGAGATCCTTAAGAAGGTGGAAGATGACTATTTCCAGAAAGCAATATTTGATGCTGCAATAAGGATCATTAGTTCTGCATCTGGGCAAGCCCTTTTAGATTCACAAGCAGCCGATATTGAGGCTTGCCACAGCGTGCTCAAGTGA 2367 0.4512 MQQGDQTVISLRPGGGRPGGGSRFLAPRLDSSSSASSTPAFGSFASDPSRPHGGALHSFSIRAGDSQFEGRERYTRDQLLQLREVGEIPEDILKIKRDIETELFGEDQSWGRGENPAQQFQNRHSEPDNRDWRGRSGQLPASAEEKSWENLSENREFGNWFDSRRQDQLNSQFARANISSNQGGPAPTLVKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKEVISLIFDTAVLEPTFCPMYALLCSDLNEKMPPFPSDEPGGKEITFKRVLLNNCQEAFEGADKLREEVRQMTAPEQEMERKDKEKLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKSCPVEENVEAICQFFNTIGKQLDESQKSRRINDMYFSQLKELSSNPKLVSRLRFMIRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNNRAGGSGPQGNMSPGGFPVARPGTGGMMPGMPGTRKMPGMSGIDNDNWEMPRRSMPRGDMLGMQAAGRGQSPLLAKSSALNSKLLPQGSGGVISGRSSALLHGGGAPPSRPSNFVSAAELASQVPTSTKGAPPSGFVEKPQAPAPKLNLDDLRSRTVFLLEEYFSVRLLDEALQCVEELKAPSYHPEFVKEAISLALDKSPPCVDIVGNLLEYLFIKKILTARDIGNGCLLFGSMLDDMGIDLPKAPNNFGEIIGKLILAGGLDFKVLTEILKKVEDDYFQKAIFDAAIRIISSASGQALLDSQAADIEACHSVLK 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0551 788 MobiDBLite consensus disorder prediction 463 487 - -
Lele20g0551 788 SMART if4_15 210 436 IPR003890 GO:0003723|GO:0005515
Lele20g0551 788 ProSiteProfiles MI domain profile. 623 745 IPR003891 -
Lele20g0551 788 FunFam Eukaryotic translation initiation factor isoform 4G-2 201 437 - -
Lele20g0551 788 Gene3D - 201 437 - -
Lele20g0551 788 MobiDBLite consensus disorder prediction 106 148 - -
Lele20g0551 788 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 52 782 IPR045208 GO:0003743
Lele20g0551 788 SUPERFAMILY ARM repeat 203 439 IPR016024 -
Lele20g0551 788 Pfam MA3 domain 625 736 IPR003891 -
Lele20g0551 788 Gene3D - 616 782 - -
Lele20g0551 788 Pfam MIF4G domain 210 436 IPR003890 GO:0003723|GO:0005515
Lele20g0551 788 MobiDBLite consensus disorder prediction 27 44 - -
Lele20g0551 788 SUPERFAMILY ARM repeat 617 767 IPR016024 -
Lele20g0551 788 MobiDBLite consensus disorder prediction 1 70 - -
Lele20g0551 788 SMART ma3_7 624 736 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0551 Lele-ChrLele20 13092021 13097347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0551 1 786 Eukaryotic Initiation Factors Gene Family AT5G57870 64.447 0.0 952