Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0550 ATGGCCGCGAAAGAAGGGAAGGCAATAGGCATAGACCTTGGAACGACCTACAGCTGCGTGGGAGTATGGCAAAACGACCGTGTTGAGATCATCCCGAATGATCAAGGCAATCGGACCACCCCATCCTACGTGGCATTCACCGACACCGAGAGGCTCATCGGAGATGCGGCGAAGAATCAGGTGGCTATGAACCCACAAAACACCGTGTTTGATGCGAAGCGTCTGATTGGCCGGCGGTTTTCCGACCCCTCCGTCCAAAACGACATGAAGCTTTGGCCTTTCAAAGTCGTTCCTGGAGCAGCAGAGAAGCCCATGATCGTCGTCACATACAAAGGCGAAGAGAAGAAGTTCGCCGCCGAAGAGATCTCGTCAATGGTTCTGATAAAAATGCGTGAAGTCGCCGAGGCGTTTTTGGGTCATCCGGACGAGAAGATTGCGAGCAAGTTAGGAGTAGATGAGAAGCAGAAGATTGAGAAGGCTGTGGAAGAGACGATAGAGTGGTTGGACGGAAATCAATTGGCTGAAGTTGATGAATTTGAGGATAAGCTGAAGGAATTGGAGGGTATATGCAACCCCATTATAGCTAAGATGTACCAGCAGGGTGGTGATGCCGGTGCTGGCGCTGCTGGTGGTGAAATGGGTGAGGACATGCCGGATTCTGGATCCGGAGGGTCTGGTTCTGGAGCTGGACCCAAGATTGAGGAAGTTGACTGA 714 0.5196 MAAKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQNDMKLWPFKVVPGAAEKPMIVVTYKGEEKKFAAEEISSMVLIKMREVAEAFLGHPDEKIASKLGVDEKQKIEKAVEETIEWLDGNQLAEVDEFEDKLKELEGICNPIIAKMYQQGGDAGAGAAGGEMGEDMPDSGSGGSGSGAGPKIEEVD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0550 237 MobiDBLite consensus disorder prediction 201 237 - -
Lele20g0550 237 FunFam Heat shock 70 kDa protein 70 125 - -
Lele20g0550 237 PANTHER HEAT SHOCK PROTEIN 70KDA 8 143 IPR013126 GO:0005524|GO:0140662
Lele20g0550 237 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 141 205 IPR029048 -
Lele20g0550 237 Gene3D - 144 200 IPR029048 -
Lele20g0550 237 Gene3D - 43 118 - -
Lele20g0550 237 SUPERFAMILY Actin-like ATPase domain 7 142 IPR043129 -
Lele20g0550 237 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Lele20g0550 237 Pfam Hsp70 protein 8 141 IPR013126 GO:0005524|GO:0140662
Lele20g0550 237 PRINTS 70kDa heat shock protein signature 7 20 - -
Lele20g0550 237 PRINTS 70kDa heat shock protein signature 57 65 - -
Lele20g0550 237 PRINTS 70kDa heat shock protein signature 35 47 - -
Lele20g0550 237 Gene3D - 10 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0550 Lele-ChrLele20 13087359 13089326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0550 138 199 Calmodulin-binding Proteins AT1G56410 51.613 1.02e-13 68.2