Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0530 ATGGCTCTTCCTTGGGCTTATGTTCTCTTCTTCCTCTCTTGTTCTGTACTCTGTTTCTCTTACGAGCCTCGTAACCATGAAGTGGAGGCTTTGATAAGCATAAGAGCTTCTTTGAATGATCCTCATGGAGTATTAAGCAACTGGGATGAGAACTCAGTAGACCCTTGTAGTTGGGCTATGATCACTTGCTCTTCTGATTCCCTTGTTATAGGCTTGGGAGCTCCAAGCCAATCTCTTTCTGGAACTTTATCTGCTGCCATAGGAAATCTGACAAATCTTCGACAAGTGTTACTGCAGAACAACAATGTATCTGGCCAAATCCCACCTAAACTTGGTACCCTTCCTAAGTTACAGACTTTAGATCTTTCTAACAATAGATTCTCTGGTGTGATTCCCAGTTCCTTAAGTCACTTGGATGGTCTCAAGAGGCTGAACAACAATAGCTTGTCTGGGCCTTTTCCTCTGTCACTAGCCAAAATCCCCCAACTTGCTTTCTTAGACTTGTCATATAACAATCTCAGTGGATCTGTACCGAAGTTTCCGGCTCGATCTCTCAATGTTGTGGGAAACCCTTTAATTTGTGGAAGCAGCTCTACTGAAGGTTGCTCTGGATCAACAACCCTCTTGCCTGTTTCATTCTCTCTTCCACCTTCACAAGGAAAGCAAAAGTCGAAGAAAATAGCGATTGTACTTGGGATTGGCCTTAGCTTTGATTATCAGGAAGATGGACTTGTTCGCTTGGGGAATCTCAATATTTTCACTTTTAGAGAGCTCCAACATGCGACAGATAATTTCAGCTCTAAGAACATACTTGGTGCTGGTGGTTTTGGCAATGTGTATTGTGGTAAGCTCGGAGATGGGACGCTGGTTGCCGTGAAGAGGTTGAAGGATGTCACTGGAAATGCCGGGGAATCACAGTTCCGAACTGAATTGGAGATGATCAGCTTGGCAGTTCACCGCAATTTACTTCGCTTAATCGGATATTGTGCTACTCCTAACGAGAAGCTTCTAGTTTACCCTTACATGTCTAATGGAAGTGTAGCATCCAGACTTAGAGGCAAACCGGCGCTAGATTGGAACACGAGAAAGAGGATAGCGATTGGAGCTGCGAGGGGTCTTCTGTATCTACATGAGCAGTGTGATCCAAAGATAATACATAGAGATGTTAAGGCTGCTAATGTGCTTCTTGATGAATACTATGAAGCCATTGTTGGGGATTTCGGCCTCGCTAAGCTCCTTGATCATGCTGACTCTCATGTCACTACCGCTGTCCGTGGCACCGTAGGCCACATTGCGCCAGAGTACCTCTCCACTGGCCAGTCATCGGAAAAAACTGATGTGTTTGGATTTGGCATTCTCTTGTTGGAGCTCATAACTGGAATGACGGCTCTCGAGTTTGGAAAAACAGTGAATCAGAAAGGTGCAATGCTAGAGTGGGTGAAGAAAATACAGCAAGAGAAGAAGGTGGAATTGTTGGTGGACAAAGAGTTAGGAAGAAACTATGATAGGATAGAGGTGGGGGAGATGTTGCAAGTAGCTTTACTTTGCACTCAGAATCAACCGATCCACCGCCCCAAAATGTCAGAAGTGGTCCGAATGCTCGAAGGCGATGGCCTCGCGGACAAATGGGCGGCTTCACAGAATCACAATAATCTCAACAACACCTTTCACAGCCACAGTAACAACAATAGTTCATCTTCTTCTCGCCCAAGCACCACCACCGCCACCACCGCTAAACATGATGATGATAATAATAACGTTCATGATTGTCCCACTATGTTTGGCATGGGACTGGATGGAGATGACGATGATGAAAACTCTTTGGATTCCTATGCCATGGAACTCTCTGGTCCTAGTGTTGGAGTTGGACCCATGAAACTTCTCCTTTTCAAGTGTCTTATTTACTGGTTGTATACTAAATGGGTAGTAGTAGTAGTACTACAATGTTGGGATGGTACAGAAGAACATCATGAGATTCTTTTCTCTCAAGAACATCATTGTCGTCATCCATCATCTTCATCTGAGGTTCTCTTCCAGCTTCAGGCAATGTTTGTGACTGGTCTTTTCTCTCAAGAACATCATTGTCGTCATCCATCATCTTCATCTGAGATTGTCTCTTCCAGCTTCAGGCAATGTTTGTGA 2142 0.444 MALPWAYVLFFLSCSVLCFSYEPRNHEVEALISIRASLNDPHGVLSNWDENSVDPCSWAMITCSSDSLVIGLGAPSQSLSGTLSAAIGNLTNLRQVLLQNNNVSGQIPPKLGTLPKLQTLDLSNNRFSGVIPSSLSHLDGLKRLNNNSLSGPFPLSLAKIPQLAFLDLSYNNLSGSVPKFPARSLNVVGNPLICGSSSTEGCSGSTTLLPVSFSLPPSQGKQKSKKIAIVLGIGLSFDYQEDGLVRLGNLNIFTFRELQHATDNFSSKNILGAGGFGNVYCGKLGDGTLVAVKRLKDVTGNAGESQFRTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDEYYEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVKKIQQEKKVELLVDKELGRNYDRIEVGEMLQVALLCTQNQPIHRPKMSEVVRMLEGDGLADKWAASQNHNNLNNTFHSHSNNNSSSSSRPSTTTATTAKHDDDNNNVHDCPTMFGMGLDGDDDDENSLDSYAMELSGPSVGVGPMKLLLFKCLIYWLYTKWVVVVVLQCWDGTEEHHEILFSQEHHCRHPSSSSEVLFQLQAMFVTGLFSQEHHCRHPSSSSEIVSSSFRQCL 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0530 713 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Lele20g0530 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Lele20g0530 713 MobiDBLite consensus disorder prediction 550 593 - -
Lele20g0530 713 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Lele20g0530 713 Pfam Protein tyrosine and serine/threonine kinase 268 534 IPR001245 GO:0004672|GO:0006468
Lele20g0530 713 ProSiteProfiles Protein kinase domain profile. 265 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0530 713 PRINTS Leucine-rich repeat signature 117 130 - -
Lele20g0530 713 PRINTS Leucine-rich repeat signature 160 173 - -
Lele20g0530 713 SUPERFAMILY L domain-like 25 194 - -
Lele20g0530 713 SMART serkin_6 265 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0530 713 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 545 - -
Lele20g0530 713 FunFam Somatic embryogenesis receptor kinase 1 235 341 - -
Lele20g0530 713 MobiDBLite consensus disorder prediction 550 580 - -
Lele20g0530 713 Pfam Leucine rich repeat 115 173 IPR001611 GO:0005515
Lele20g0530 713 FunFam Putative LRR receptor-like serine/threonine-protein kinase 24 204 - -
Lele20g0530 713 Gene3D Ribonuclease Inhibitor 24 204 IPR032675 -
Lele20g0530 713 Gene3D Phosphorylase Kinase; domain 1 236 341 - -
Lele20g0530 713 FunFam Somatic embryogenesis receptor-like kinase 1 342 554 - -
Lele20g0530 713 SUPERFAMILY Protein kinase-like (PK-like) 248 535 IPR011009 -
Lele20g0530 713 Gene3D Transferase(Phosphotransferase) domain 1 342 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0530 Lele-ChrLele20 12944742 12948781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0530 1 618 Receptor kinase-like Gene Family AT5G16000 60.152 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele20g0530 PK_Tyr_Ser-Thr 4.9e-41 CL0016