Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0520 ATGAACAGAATGCGAAACCTGAGTTCTGTGAAGCGAGAATTGCTCCGGAAATGGATAAAGGATCTTAGAAAATGGAGGTCGTTGAAGAACAACATGAGCTTCTTGGAGAGAAAGAAAGCCATAAAGCTTTCTGCAGATTTGGCCATGGCTTCCACCCGAAGCGGAACCACACGGTGGAGCCGAGCCCTTATCGCCGAAGCCACCTCACGGGACGATGACGACAACGGCTACAACAAAATCCTCACGGAGCACATAGTTGGCTCGCCGGAGAACCACCAAAGGCCGACAGGGAACACTCTCATCAGAGCGACGTCTTCGTCGTCGTCGTCTGGCCTTTGTACAAGCAGAAGGATCTTGAAACGAAGCCGTATGCTGCCTCGCAGAGTAGTGAAGAAGAAGAAGACGAAGAAAATAGGGTCACGAAAGGTGATGGCGAATTGTATCGCGAAGAAGTTGGGGAAGAAGAAAACGAGAATGCTCAAAAGTCTGTTACCAGGAGGAGAATCCATGGAGGACGACGTCGTTCTGATTGAAGAAACCCTAGATTATATACAATCTCTGAGAGCTCAAGTTGAAGTAATGCGATGTCTTGCCACTGCCTCTGAGCTCATCAGAAATTCGTAA 624 0.4856 MNRMRNLSSVKRELLRKWIKDLRKWRSLKNNMSFLERKKAIKLSADLAMASTRSGTTRWSRALIAEATSRDDDDNGYNKILTEHIVGSPENHQRPTGNTLIRATSSSSSSGLCTSRRILKRSRMLPRRVVKKKKTKKIGSRKVMANCIAKKLGKKKTRMLKSLLPGGESMEDDVVLIEETLDYIQSLRAQVEVMRCLATASELIRNS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0520 207 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 199 IPR044660 GO:0006355
Lele20g0520 207 CDD bHLH_AtIBH1_like 154 198 IPR044549 GO:0006355
Lele20g0520 207 MobiDBLite consensus disorder prediction 89 112 - -
Lele20g0520 207 MobiDBLite consensus disorder prediction 88 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0520 Lele-ChrLele20 12864804 12865427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0520 4 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 39.698 6.15e-31 110