Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0517 ATGGGCAGAACCCGAACCTTGTTAGAAGTCAAAGGAGCAACCTTTTTGTCTCCCTCATCACAACCCCAATACTTGTTTTCCCCTCCCAACGTTGTTGTTGGATCTGAAGATTCGAATATAAAAGACACCGTCAGCCCCAGCGTACTCCTCATCATCATCATCCTCGCCATCGTCTTCTTCGTCTCTGGTTTGCTCCACCTTCTTGTTCGGTATCTATGGCGGCCACAAAATAGAGACCCGGACGATGTAGACGATGTTACCGTTCTTCAGGGACAACTTCAGCAGCTTTTCCACCTCCATGATTCTGGGGTTGACCAATCCTTCATCGACACCCTCCCTGTCTTCCTCTACAAGGCCATCATCGGACTCAAGAACCCTTTCGATTGCGCCGTTTGTTTGTCGGAATTCGAGCCAGACGACAAGCTCCGATTGTTGCCCAAATGCAGCCACGCCTTCCACATGGATTGTATCGACACGTGGCTCTTGTCTCACTCAACCTGCCCTATCTGTCGAGCTTGCTTGCTCAATGATTTCTCCTCCACCAACGCCTGTTCCCCCATTGTTCTCGTCCTTGAATCTGGGAGCGACAACAACTCCAGAGAAATTGCCCCAGAAACAGACGAAACCGGATCCAGGTCGACCAGGTTCCACTCGAATCACGATTCCGGCGAAGTCGTCACTGTGAAACTGGGAAAGATCAGGAATGTCGATAATAACAACAACGGTGAGGGTAGTAGCATTGTCGGTGATACTGATGATAATAATAATGCAGAAGCAAGAAGGTGTTTTTCTATGGGTTCTTTTGCTTATGTGATGGATGAGAGTTCTTCGCTTCATGTACCCATTAGAGCACAGATCAAGAAGAAGCATGCTCTGCGATTAACACCGAACAGGCTTGCAATGTCGGAATGTGACTGTGAATCGAGGAGGGATTTCAGATTCTCTGGTTCAGATGGGAACAGAGTTGAAGAAGAAGAAGTAGGAACTGGGAATTATTCAAGCTCTGGTGGGCTTATTACCAGAAAGGAATGTTTTTCAGTGTCGAAGATTTGGCTTAGGGAGAAAAAAGAGAAGAGGAAAAATGGGATTGAGGATTCAACGAGGAGAGCTGTGTCGTTTAGGTTTCCATTGCAGAGAAATGACGAAGGGAAATTGGAATCAAGAAGTACGATTTCTGAGATGGAGATTACAAAATGGGAGAATAATGGAGGAGGTAGTGAATTTGGAACTTATGATGATGAAGAAAACCAGAGTTGTTACAGTGTAGATTCACAGGCGAATTCTATTAGGGCTCCTTCATTTGCAAGAAGAACTCTGCTTTGGCTCACCGGAAGACAACAGAACAAGGTTGTTCATCATTCATCGTCCTCTGTTTCCGGCTATCTGTAG 1389 0.4615 MGRTRTLLEVKGATFLSPSSQPQYLFSPPNVVVGSEDSNIKDTVSPSVLLIIIILAIVFFVSGLLHLLVRYLWRPQNRDPDDVDDVTVLQGQLQQLFHLHDSGVDQSFIDTLPVFLYKAIIGLKNPFDCAVCLSEFEPDDKLRLLPKCSHAFHMDCIDTWLLSHSTCPICRACLLNDFSSTNACSPIVLVLESGSDNNSREIAPETDETGSRSTRFHSNHDSGEVVTVKLGKIRNVDNNNNGEGSSIVGDTDDNNNAEARRCFSMGSFAYVMDESSSLHVPIRAQIKKKHALRLTPNRLAMSECDCESRRDFRFSGSDGNRVEEEEVGTGNYSSSGGLITRKECFSVSKIWLREKKEKRKNGIEDSTRRAVSFRFPLQRNDEGKLESRSTISEMEITKWENNGGGSEFGTYDDEENQSCYSVDSQANSIRAPSFARRTLLWLTGRQQNKVVHHSSSSVSGYL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0517 462 FunFam RING-H2 finger protein ATL46 91 176 - -
Lele20g0517 462 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 178 IPR013083 -
Lele20g0517 462 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 42 351 - -
Lele20g0517 462 SMART ring_2 129 170 IPR001841 -
Lele20g0517 462 CDD mRING-H2-C3H2C2D_ZSWM2 129 171 - -
Lele20g0517 462 Pfam Ring finger domain 128 171 IPR001841 -
Lele20g0517 462 MobiDBLite consensus disorder prediction 201 219 - -
Lele20g0517 462 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Lele20g0517 462 MobiDBLite consensus disorder prediction 197 219 - -
Lele20g0517 462 SUPERFAMILY RING/U-box 108 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0517 Lele-ChrLele20 12842758 12844146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0517 38 458 C3H Transcription Factor Family AT2G18650 43.333 3.18e-87 271