Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0514 ATGCTCTCGAGATCTTCCTTAGACTTATTGAATTTGGTCTCCATCGATGATTACAGAACTCTGAGCCGGATCCCAAAAGACATGGCCCTCCCAGGAGTTCTGCCCAAATTCGAAGTCCGCGACGATGCCGATTCCGGTGCGGGCTCCGACTATATCGTCTCCCCTGTTCCGCAAGAACGCAGGATCATCGTCGCCAATCAGTTACCGATAAAATCGTTTCGTGACAACGAGACCAGAAAATGGAGTTTCGAATTAGATAGTGATAGTCTCTATCTCCAGCTCAAAGACGGGTTTCCCTCCGACGTCGAGGTTCTCTATGTGGGTTCCTTGAAAGCCGATATCGATCCATCGGAACAAGAAGAAGTGTCTCAAATATTACTTGAAAAGTTCCGATGCGTGCCGACGTTTTTACCAGTTGAGATTCAGAACAAGTTCTACCATGGATTCTGCAAGCATTACCTCTGGCCTCTGTTTCACTACATGTTACCTATGTCGCCGAGTCACGGTGCCCGTTTCGAACGCTCCCAGTGGAAAGCTTACGTTTACGCCAACAAGATTTTCGCCGATAAGGTAACGGAGGTGATAAACCCAGAGGAAGATTACGTTTGGATTCACGATTATCATCTCATGATCTTACCTACCTTATTGAGAAGAAGGTTCCACAGAATCAAACTCGGATTTTTCCTCCACAGCCCATTTCCATCCTCTGAAATCTACAGAACAATCCCAGTTCGTGATGATATCCTTCGTGCTCTGTTAAATTGCGATTTAGTCGGTTTCCATACGTTTGATTACGCGAGACATTTCTTGTCCTGTTGCAGTAGAATGCTGGGTTTGGATTATGAATCCAAGAGGGGTTACATTGGGCTAGATTATTACGGCCGTACAGTGACGGTCAAGATCTGGCCTGTGGGGATTCATATGGGTCAGCTCCGATCGTCGTTATCTTTATCTCATACTCGTGATAGGATTAAAGAATTGAAGAAACAATACGAGGGGAAGATCGTTATTCTGGGTGTGGACGATATGGATTTGTTCAAAGGTTTAAGCTTGAAGTTACTGGCAATGGAACAACTCTTGGAGGTTAACGAAGATTTAAGGGGTAAAGTAGTTTTAGTTCAGATTCTGAACCCAGCAAGAAGCAAAGGAAAAGATATTCAAGATGTTCAAAATGAAACACATTCAATCGCGAATGAGATCAACCTGAAATACGGCGAACCTGGTTACCAGCCAATCGTGTTCGTTAACGGACCTGTTTCGACGCAGGAGAAAGCCTCGTACTTCGCCATTTCTGAATGCTGCGTTGTGAATGCTGTAAGAGATGGTATGAATTTAGTTCCTTACAAGTACACTGTTTGTAGACAGGGGATCGACACAACAAATGATTCGAAAAGTCCTAAACGAAGTGTCATCATAGTGTCTGAATTCATCGGTTGTTCTCCGTCCCTAAGCGGAGCAATCAGAGTGAACCCATGGAACATAGAAGACGTCGCAGAGGCTATGAATTCGGCGATTACAATGTCAGAGGCAGAGAAACAACTGCGTCACGAAAAACATTACAAGTACATAAGCTCGCATGATGTAGCCTATTGGGCTAGAAGCTTCGATCAGGATTTAGAAAGAGCTTGTAGAGAACATTACCATAAGAGATGTTGGGGTGTTGGTTTTGGCTTGGGATTTAGAATCGTCGCTCTTGATCCTACATTCAGGAAGCTTTCAGCAGAAAACATTGTATCTGCGTATAGAAACACACAGAGCAGGTTGATCCTTTTAGATTACGACGGTACGATGATGCCACAGGCTTCAGTCGACAAAGCCCCAAGCGAAGAGGTTATTTCAGTGTTGAATCACTTATGTAGTGACCCGAGAAACGTAGTGTTCATAGTTAGCGGCAGAGATAAGAATTGCCTCAGCAAGTGGTTTTCTCCATGCCAGAAGCTGGGCCTTTCAGCAGAGCATGGCTTCTTTACCAGGTGGAGTTGTGATAGTCCTTGGGAAACATGTGGGTTAGGAATAGATTTCGAATGGAAAAAGGCTGTAGAACCAGTGATGGCGCATTATACAGAAGCAACTGATGGTTCTTTCATTGAACCAAAAGAGAGTGCTTTGGTTTGGCACCACCAAGAAGCTGACCCTCATTTCGGATCATCCCAAGCAAAAGAGCTTCTGGATCACCTCGAAAGCGTGCTAGCCAATGAACCAGTAGTAGTAAAAAGAGGACAAAACATCGTTGAAGTAAAACCTCAGGGTGTGAGCAAAGGCATAGTAGTGGAGAATCTAATCTCAACGATGCAGAGTAAGGGAAAGGCACCGGGTTTTCTTTTGTGCATAGGAGATGATAGGTCAGATGAAGATATGTTTGAGAGCATTGCTGGTTCAAGCTGTGATCCAACCCAACAAGCCATAAAACATGTCTACGCCTGCACTGTGGGTCAGAAGCCAAGCATGGCAAAATATTATCTTGATGACACTGTGGAAGTAATCAAGTTACTCGAAGGATTATCCTCTGCATCATCATCAACCCAAAAGCCCCTACACTCTCAGGATCTTGATAGATACATAGACTTAACATAG 2574 0.4433 MLSRSSLDLLNLVSIDDYRTLSRIPKDMALPGVLPKFEVRDDADSGAGSDYIVSPVPQERRIIVANQLPIKSFRDNETRKWSFELDSDSLYLQLKDGFPSDVEVLYVGSLKADIDPSEQEEVSQILLEKFRCVPTFLPVEIQNKFYHGFCKHYLWPLFHYMLPMSPSHGARFERSQWKAYVYANKIFADKVTEVINPEEDYVWIHDYHLMILPTLLRRRFHRIKLGFFLHSPFPSSEIYRTIPVRDDILRALLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTVKIWPVGIHMGQLRSSLSLSHTRDRIKELKKQYEGKIVILGVDDMDLFKGLSLKLLAMEQLLEVNEDLRGKVVLVQILNPARSKGKDIQDVQNETHSIANEINLKYGEPGYQPIVFVNGPVSTQEKASYFAISECCVVNAVRDGMNLVPYKYTVCRQGIDTTNDSKSPKRSVIIVSEFIGCSPSLSGAIRVNPWNIEDVAEAMNSAITMSEAEKQLRHEKHYKYISSHDVAYWARSFDQDLERACREHYHKRCWGVGFGLGFRIVALDPTFRKLSAENIVSAYRNTQSRLILLDYDGTMMPQASVDKAPSEEVISVLNHLCSDPRNVVFIVSGRDKNCLSKWFSPCQKLGLSAEHGFFTRWSCDSPWETCGLGIDFEWKKAVEPVMAHYTEATDGSFIEPKESALVWHHQEADPHFGSSQAKELLDHLESVLANEPVVVKRGQNIVEVKPQGVSKGIVVENLISTMQSKGKAPGFLLCIGDDRSDEDMFESIAGSSCDPTQQAIKHVYACTVGQKPSMAKYYLDDTVEVIKLLEGLSSASSSTQKPLHSQDLDRYIDLT 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0514 857 Gene3D Glycogen Phosphorylase B; 55 313 - -
Lele20g0514 857 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 544 - -
Lele20g0514 857 CDD GT20_TPS 60 540 IPR001830 GO:0003824|GO:0005992
Lele20g0514 857 SUPERFAMILY HAD-like 587 833 IPR036412 -
Lele20g0514 857 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 588 789 IPR006379 -
Lele20g0514 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Lele20g0514 857 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 54 836 IPR001830 GO:0003824|GO:0005992
Lele20g0514 857 Gene3D Glycogen Phosphorylase B; 314 524 - -
Lele20g0514 857 CDD HAD_TPP 588 829 - -
Lele20g0514 857 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 586 703 - -
Lele20g0514 857 Pfam Glycosyltransferase family 20 60 540 IPR001830 GO:0003824|GO:0005992
Lele20g0514 857 TIGRFAM T6PP: trehalose-phosphatase 586 834 IPR003337 GO:0003824|GO:0005992
Lele20g0514 857 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 716 848 - -
Lele20g0514 857 FunFam Alpha,alpha-trehalose-phosphate synthase 314 524 - -
Lele20g0514 857 Pfam Trehalose-phosphatase 590 823 IPR003337 GO:0003824|GO:0005992
Lele20g0514 857 Gene3D - 715 849 IPR023214 -
Lele20g0514 857 Gene3D - 586 698 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0514 Lele-ChrLele20 12813372 12816120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0514 1 842 Trehalose Biosynthesis Gene Families AT2G18700 67.373 0.0 1192