Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0511 ATGGTGATAACGGTAGGAGAAGCTTCTCTTTCTCCCCTCTGGTACAATCGTCTCCGCTTCAAAACATCTTCTAGATTCAGAAGTTGCTTCGCCCGAGCTAGTATCTCCATCCAGAGAAGACCCAATAACACCCACTCGTGGAATCCTGGGCACCTCTCTACCAGCAACGAGGCAGCAAATTTTGATCCCTTGGGTATTAATTCGGATTTATCTTCTGCTCTGAACTCTTCTTGGGATAATTTGAGGATTAGTTCAATTGATTTTGGGGACTTCTTCAAAGGTCCCTTGCCAGGAAAGTTTCTCAAGCTTTTAGGACTTCTTGTTTTGTCAAGGCTTGGTGTATACATACCACTGGGTGGGGTTAACAGGGATGCTTTTGTCTGCAATTTGGACCAGAACAGTTTATTAAGCACTCTAGACTCTTTTTCTGGAGGAGGTATTGGAAGACTTGGGATATGCTCTCTTGGTATTGTCCCCTTCATTAATGCCCAAATTGTGTTTCAAATTCTTGCACAAGTATATGCTAAGCTGCAAGATCTTCAAAAAAGAGAAGGTGAATCAGGAAGAAAGAAAATTCTTCAGTACACAAGATATGCCTCAGTTGGACTCGCCGTTGTTCAGGCAATTGGTCAAGTACTCTACCTACGTCCTTATGTCAATGGGCTGTCTTCAGTTATCTTATTGACTCTTGGATCTGTATTTACAACATATATTGGTGAGCGAATTTCAGACCTAAAACTTGGTAATGGCACATCGCTTTTGATATACAAACATTATCTCTTGCCTGCCTCTTTTGGAAGAACATTTGTACAAGGATTTAATGATACTAACTACGTTGGACTCATCACCTTGATCGTGTCCTTCTTTTTCTTGGTTCTTGGTATTGTTTATGTTCAGGTTCTTAGTCGAATATTAGTTCTCGGTTCAACATTTCTAGCGATTTTAGCTGCTGGACCAGCTGTTGTTGAGCAGCTTACGCACCTGACTGCATTTAGGGGATTTGCTGGAACGTCTATTCTTATTCTTGTTGGTTGTGCCACAGACACAGCAAGAAAAGTTCAAGCTGAGATTATATCCCAGAAGTTCAAGAACATAGAATTCTATGACTTCGACAAGTATTGA 1122 0.4109 MVITVGEASLSPLWYNRLRFKTSSRFRSCFARASISIQRRPNNTHSWNPGHLSTSNEAANFDPLGINSDLSSALNSSWDNLRISSIDFGDFFKGPLPGKFLKLLGLLVLSRLGVYIPLGGVNRDAFVCNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQILAQVYAKLQDLQKREGESGRKKILQYTRYASVGLAVVQAIGQVLYLRPYVNGLSSVILLTLGSVFTTYIGERISDLKLGNGTSLLIYKHYLLPASFGRTFVQGFNDTNYVGLITLIVSFFFLVLGIVYVQVLSRILVLGSTFLAILAAGPAVVEQLTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKFKNIEFYDFDKY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0511 373 ProSitePatterns Protein secY signature 2. 237 254 IPR030659 -
Lele20g0511 373 SUPERFAMILY Preprotein translocase SecY subunit 300 356 IPR023201 -
Lele20g0511 373 PRINTS Preprotein translocase SecY subunit signature 244 267 - -
Lele20g0511 373 PRINTS Preprotein translocase SecY subunit signature 100 118 - -
Lele20g0511 373 PRINTS Preprotein translocase SecY subunit signature 150 170 - -
Lele20g0511 373 PRINTS Preprotein translocase SecY subunit signature 192 215 - -
Lele20g0511 373 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 92 270 IPR002208 GO:0015031|GO:0016020
Lele20g0511 373 SUPERFAMILY Preprotein translocase SecY subunit 92 301 IPR023201 -
Lele20g0511 373 ProSitePatterns Protein secY signature 1. 151 170 IPR030659 -
Lele20g0511 373 Pfam SecY 152 301 IPR002208 GO:0015031|GO:0016020
Lele20g0511 373 Gene3D SecY subunit domain 91 300 IPR023201 -
Lele20g0511 373 Gene3D SecY subunit domain 301 362 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0511 Lele-ChrLele20 12793121 12796471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0511 300 373 Chloroplast and Mitochondria Gene Families AT2G18710 87.838 4.78e-36 136