Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0507 ATGATGAGCGTGTTCTGCAAGTTAAGAAAAAGGCATCCTAAGTTCATGGATGTGAAAGAAATTAGAAAGAATAATTACTGTGTGGGGTATATGAAAACGCTTCTGAAGAATCAATTGGGATTCAAGGATCAGTTAAAGTTGAAGGCATACGAGACGGCTGAAGCATATGATCGAGCTCTGACAAGGGTTAAAGGCTCGAATGGTGAACTGCTTATTAATAGCTCTGTATCTTTGAATAGAAGCGATTCCAGATTATTCCCTGCAAGTGATATCGTAGAAGGAGATAGAGCCATTACTACAGTCGATCTTCGAATCAGGGATTCTCAGAATGATGTCATCACAGCAGCATCTGCAGCAACAAGTCCATCTCTTTCTCGAAAACGAAGAAAATTCTTCGTAAGGACAGCACAAGATGATCGCTCACACGTGAATGCTATAGCCGCCATTGTTGAAACCTACGGATGGCACGAAATCATCACAATCTACGAAGATACCGACTACGGCAAGGGTCTGATCCCATATCTCACAGACGCCTTGGAGAAAGTTAATTCACGAGTGCCTTACAGAATTGTCATCGATCCAAATTCTGAGGAAAACGAAATTTTGGACGAGCTGAAGAAGCTAAATCAGAGTCGAAAAAGAATATTTCTTGTTCACAGGACTGGCCTTGTTGGGCCCAAATTCTTCTCAGCTGCGAACAAAGCTGGAACGATGAGGGAAGGGTATGGTTGGATAGTCACAGATGGTTTATCTAATGTGTTAGACCCTTTGGGTCCAAAAGTGATGGATTCTATGCAAGGTGTCTTAGGGGTAAGGCCAAAAGTTAAGAAATTTAGAAGGCTTACGAGTTTCAGAAAAAGATGGAAAGCTTTGTCAATTAAACCTCTATTAACGTTGTTTGGACTTTGGGGTTATGACACAGTTTGGGCGATAGCCATGGCAGTAGAGTCTACGTTTGCAGATTCTAAGAGTACTCCTGATGTTTCTGGCTTTACTATTGATGTGTTTCTCGAAGTTATCAAAGCTTTACATTTTCCTCTTCCTTATGAGTTTCACCCATTCCAGATTAATAATGGAGAAGCTACCGAGTCTTCTAATGATCAGCTTGTGTACGATGCTGTGGTTGGGGACATAACTATTGTAGCTAGCCGTGCTGAACATGTTGATTTTACATTGCCGTTCTCAGAATATGGGGTGTCAACGGTAGTTTCGATGAAGCATGATGAGAGACAAAACATGTGGATCTTCTTGAAGCCTTTGAGTCCAGGTCTTTGGCTGACCACAGGTGAAGCATTCGTCCTCACAGATGAAGAAAAATTTGAAAGGATTAGGAGCAAGTACTTCTCCAGCGTAATCATATCTGAAGATGAAAGAGGATCATCAACTCCAAACAGTCCCATTAGTCTCACAGTGTCAAGCTTTGGAGGGCTTTTCATCATCACAGGGGTCACTTCTGGGATTTCACTTGTGTTGTATTTGTTCAAGTTTGGCTACTCTCATCCGTCAGAAGAAATGTCTTTGGTTGTTGTAGCTAAAGGCTCGAATAGTCAAGTGCCTCTCGGAACGAAAGAATATCTCTTTACCTTTGAATAG 1593 0.4168 MMSVFCKLRKRHPKFMDVKEIRKNNYCVGYMKTLLKNQLGFKDQLKLKAYETAEAYDRALTRVKGSNGELLINSSVSLNRSDSRLFPASDIVEGDRAITTVDLRIRDSQNDVITAASAATSPSLSRKRRKFFVRTAQDDRSHVNAIAAIVETYGWHEIITIYEDTDYGKGLIPYLTDALEKVNSRVPYRIVIDPNSEENEILDELKKLNQSRKRIFLVHRTGLVGPKFFSAANKAGTMREGYGWIVTDGLSNVLDPLGPKVMDSMQGVLGVRPKVKKFRRLTSFRKRWKALSIKPLLTLFGLWGYDTVWAIAMAVESTFADSKSTPDVSGFTIDVFLEVIKALHFPLPYEFHPFQINNGEATESSNDQLVYDAVVGDITIVASRAEHVDFTLPFSEYGVSTVVSMKHDERQNMWIFLKPLSPGLWLTTGEAFVLTDEEKFERIRSKYFSSVIISEDERGSSTPNSPISLTVSSFGGLFIITGVTSGISLVLYLFKFGYSHPSEEMSLVVVAKGSNSQVPLGTKEYLFTFE 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0507 530 SUPERFAMILY Periplasmic binding protein-like I 116 347 IPR028082 -
Lele20g0507 530 FunFam Glutamate receptor 138 293 - -
Lele20g0507 530 SUPERFAMILY Periplasmic binding protein-like II 324 434 - -
Lele20g0507 530 Pfam Bacterial extracellular solute-binding proteins, family 3 325 406 IPR001638 -
Lele20g0507 530 SMART GluR_14 310 495 IPR001320 GO:0015276|GO:0016020
Lele20g0507 530 Gene3D - 306 435 - -
Lele20g0507 530 Gene3D - 140 305 - -
Lele20g0507 530 Pfam Receptor family ligand binding region 116 319 IPR001828 -
Lele20g0507 530 PANTHER OS06G0188250 PROTEIN 118 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0507 Lele-ChrLele20 12735359 12741593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0507 311 434 Ion Channels AT5G27100 38.636 3.65e-16 80.1