Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0506 ATGGCAAACCCAAATCACCATTATATCCATGGCCAAGAGCACGATACTCTGACATTTTTTGTAGTCTTGTTATTAATGGCTCAGGTTGCAGCAGGTGATGATGCAGATTCACTAGTCTTGGAAGGGAAGAAGAAGTTGATAGTTGGTGTTCCTAAGAAGTGTGGCTTAACAGATTTCGTGGATTTAAAACTGGATTCTAGAAACATGAGTCAAGTCGAGAAAGCTCAGGGCTATTCCATTGATGTTTTCAACGCTACAATAAGCTACCTTCAGAATATTTCAGTGGAGTATATGGCCTTCGCAAACGAAGATGGAACTTGTGTTGAGGATTACGACGCACTTCTCGACCAGATCTCTAAAAGAAAGTATGGTGCTGTGGTGGGAGATGTCACAATTGTGGCAAATCGTTCTAACTATGTAGATTTTACATTACCGTATACACAATCTGATGTGAAGATGCTTGTGAAGCTTCGACATGATCCAAGGTTAAATATGTGGATTTTTGTAAGACCTTTTAGTTGGGATCTATGGTTGTCCATTGCCATCGTCTGTGTTTTCATAGGAGCTATCATATTATTCATGGAACGCCATGTTAAGCAAGATTCAGGACCTCAAAATTCGTCATGTAAGAAGCAAGTTAGTGTGGTTTCTATTCTATGGTTTCCTCTGGTGCAAGCAGTTCTTCCTGAAAAAGAATCATTGGCCAAGAATTGCTCTAGGTTTGTGCTTGTGTTGTGGTTGATATTAGCGTTTGTGCTGATGCAAAGTTACACAGCATGCTTGTCATCAATCTTGACAGTACGTCAGCTGCAACCTCGTTACCCTAGTGAGATTGATGTTATAAATGACCACAACGTTAACATTGGATACCAGGGTGGCTCGTTCATTAAAGGCTTGTTGCTGGAGAAATTAAAAGTTGACAAGTCAAGGGTGAAGAACTATTCCACCATTGAACAATACAAAGAGGCTTTGGATAAAGGAAGCCATAAAGGTGGTACCGATGCTATTTTTGATGAACTTCCCTACATTAAAGTCTTCCTCAAAAAATATGGTTCTAATTATGCCATGATTGAAACTCTGCACCGCACCGATGGATTTGGTCTTGCATTCCCCAAAGGCTCCACCTTAACTTCACAGTTTTCGAGTGCCATATTGAAGCTTTGGTAG 1167 0.4045 MANPNHHYIHGQEHDTLTFFVVLLLMAQVAAGDDADSLVLEGKKKLIVGVPKKCGLTDFVDLKLDSRNMSQVEKAQGYSIDVFNATISYLQNISVEYMAFANEDGTCVEDYDALLDQISKRKYGAVVGDVTIVANRSNYVDFTLPYTQSDVKMLVKLRHDPRLNMWIFVRPFSWDLWLSIAIVCVFIGAIILFMERHVKQDSGPQNSSCKKQVSVVSILWFPLVQAVLPEKESLAKNCSRFVLVLWLILAFVLMQSYTACLSSILTVRQLQPRYPSEIDVINDHNVNIGYQGGSFIKGLLLEKLKVDKSRVKNYSTIEQYKEALDKGSHKGGTDAIFDELPYIKVFLKKYGSNYAMIETLHRTDGFGLAFPKGSTLTSQFSSAILKLW 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0506 388 Gene3D - 166 301 - -
Lele20g0506 388 SUPERFAMILY Periplasmic binding protein-like II 18 387 - -
Lele20g0506 388 Pfam Ligand-gated ion channel 173 276 IPR001320 GO:0015276|GO:0016020
Lele20g0506 388 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 387 - -
Lele20g0506 388 Gene3D - 41 165 - -
Lele20g0506 388 Pfam Bacterial extracellular solute-binding proteins, family 3 74 387 IPR001638 -
Lele20g0506 388 SMART GluR_14 45 387 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0506 Lele-ChrLele20 12720163 12722286 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0506 44 387 Ion Channels AT2G29120 40.751 5.42e-70 235