Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0504 ATGGCCAGCCCAAATTACTGCTACCATGGTTACCTTATAATGATTTCTTGTGTCGTGTTGTTAACAGCTGAGATTATTGGAGCAAGCGATGATGATGGAGGGTCACAGCTCCTAGGAGGGAAGAAGTTGATAATTGGTGTTCCTAAGAAAGTAAGCTTCATTCAGTTTGTGAATACACAACTGAATCCTTGGAACAAGACTCAGCTCGTGAATGTTACTGGCTATTCTATTGACGTTTTCTGTGCTACAATAGCTTACCTTCAGCGTTCAAATTACAATATTTCTTTCGAGTTTCGTGCTTTTGTAGACCAAAATGGAAACACTCCTGGGGGTTATGATGCACTCGTCTACCAGGTTCACCAAGGAAAGTACGATGCTGCAGTGGCAGATTTGTCTATCGTGGCAAATAGGTCAAACTTCGTAGATTTCACGTTACCATATGCACAGTCCGATGTGAGGATGCTTGTCAAAGTCCAACATGATCCCCGCTTGCATATGTGGATTTTCTTACGACCATTCAGTTGGGACATGTGGTTGTGCACCGTCGTGATCTGTATTTTTACAGGAGGTGTCATAGTATTCATGGAACGCAATGTCCAGCAAGATTCAACACTTGAAAATTCTCCCATTAAGAAACAACTTAGTGTGGTTTCTATACTGTGGATTCCCGTAGTGCAAGCAGTTTTTCCTGAAAGAGAATCATTGGCCAAGAACAGCTCTAGGTTTATGATTGTGATGTGGTTGATTTTGATCTCTGTACTAATGCAAAGTTATACGGCATGCTTGTCATCAATCTTGACAGTTCATCAGCTTCAATCTCGTTACCCTAGTGAGTATGCCATTAGAACAGACCCTAATATTCACGTTGGATGCCATTATGGCTCATTCCTCAACGGCTTATTGGTTGATAGCTTGAAAGTTGATAGTTCAAGGGTAAAGGAATACGCTGGCATCAAAGAGTATAAGGAGGCCTTAGATAAAGGAAGTCGTAAGGGTGGTGTCGACGCCATTTTTGATGAAGTTCCCTACATTAAAGTCTTCCTTAAGAAATATGGTTCAAATTATGCCATGGTAGGGCCTAGGCATCGCACTGGAGGATTTGGCTTTGCATTTCGTAAGGATTCAACCTTAACATCGTACTTTTCTCGAGCCATATTAAATATAAGTGAGAGTAATGAAATGGACGAAATTGAGGACAGATATTTCAAAACAGCTCGTGACGATGATGGCATATCAACTTTATCGTTAGAAGATGATAGTCCCAGCCTCACAGCATATAGCTTTGCAGGTTTGTTTGTAGTATTCGGAATTCTTTCACTGTTAGCTTTGTTAGTCTCTGAACATCGTACTTGGACAAGACATGTTCTGCTAATGAAAATGTATAGCAAAACATTCTTGAGTCGGAGTTCTACAAGAATTGATGTGACAGAGGAAGGTTCTACAAGAAGAGATGTTGATGATGGAGAAGATTGCCTTGGAGCTCAGCTTCTTCTTCTGCAACAAAACTCCCGAACTGTGAGTGGGTCATCGAATTTGATGAGAATAGGCGTACCAAAGAAAGATGGTTTCACCCAATTCGTGAAAGTACGTTGGGAAGCTCGTGAGAATAAGTACAAGGTCTCTGGAGGATATTGCATTGATGTCTTCAATGCTGTCATAAAACACTTACCTTTCAATGTTTCTCCTGGCTTTATTCCCTACGTCAATCATCAAACAGGACAAAGTGCAGGCACATACGATTCACTCCTCCAACAAATTCCTGAAAAGGTTAGCTATCGAAGATTGTAA 1788 0.41 MASPNYCYHGYLIMISCVVLLTAEIIGASDDDGGSQLLGGKKLIIGVPKKVSFIQFVNTQLNPWNKTQLVNVTGYSIDVFCATIAYLQRSNYNISFEFRAFVDQNGNTPGGYDALVYQVHQGKYDAAVADLSIVANRSNFVDFTLPYAQSDVRMLVKVQHDPRLHMWIFLRPFSWDMWLCTVVICIFTGGVIVFMERNVQQDSTLENSPIKKQLSVVSILWIPVVQAVFPERESLAKNSSRFMIVMWLILISVLMQSYTACLSSILTVHQLQSRYPSEYAIRTDPNIHVGCHYGSFLNGLLVDSLKVDSSRVKEYAGIKEYKEALDKGSRKGGVDAIFDEVPYIKVFLKKYGSNYAMVGPRHRTGGFGFAFRKDSTLTSYFSRAILNISESNEMDEIEDRYFKTARDDDGISTLSLEDDSPSLTAYSFAGLFVVFGILSLLALLVSEHRTWTRHVLLMKMYSKTFLSRSSTRIDVTEEGSTRRDVDDGEDCLGAQLLLLQQNSRTVSGSSNLMRIGVPKKDGFTQFVKVRWEARENKYKVSGGYCIDVFNAVIKHLPFNVSPGFIPYVNHQTGQSAGTYDSLLQQIPEKVSYRRL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0504 595 Gene3D - 167 288 - -
Lele20g0504 595 Gene3D - 508 590 - -
Lele20g0504 595 Gene3D - 35 166 - -
Lele20g0504 595 SUPERFAMILY Periplasmic binding protein-like II 17 403 - -
Lele20g0504 595 SMART GluR_14 42 404 IPR001320 GO:0015276|GO:0016020
Lele20g0504 595 Gene3D - 297 408 - -
Lele20g0504 595 Pfam Bacterial extracellular solute-binding proteins, family 3 100 403 IPR001638 -
Lele20g0504 595 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 448 - -
Lele20g0504 595 CDD GluR_Plant 41 402 - -
Lele20g0504 595 Pfam Ligand-gated ion channel 404 437 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0504 Lele-ChrLele20 12676012 12681357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0504 506 586 Ion Channels AT2G29120 30.864 2.79e-08 55.1