Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0502 ATGGGAATCGAGATGGTAAGCCTCAAGGGCTTTCGTAGTGGCGGCTGTAGCTTGCCGCCGAAGCCATGTAACTCGTGCAAATCGGCGGCCGCCGCGGTTTTCTGCCGAGCCGACTCAGCTTTTCTGTGCATGCTCTGTGACAACAAGATTCACTCCGCCAATAAGCTTTCTTCGCGGCATGAGCGTGTGTGGATGTGTGAGGTTTGCGAGCAAGCCCCTGCCTCCGTGACTTGCAAGGCCGACGCTGCCGCTCTCTGCGTCACGTGTGATTCTGATATCCACTCCGCCAATCCGCTGGCTCGCCGTCACGAGCGTGTCCCGGTGGAGCCCTTCTTTGATTCCGCCGACTCTATTGCGAAAGCCTCCGCTGCTGCCTTTAACTTGTTGGTTCCAACTGATAACGGAATTGGATCCGATGGATTCCCACAGGATGAATCCGAATCAGCATCATGGCTGATTTCCAATCAGAATTTCAACCCGAAGATAATGGATGTTCCAGATATCAAATCGGGCGATTTGTTTTTCCCGGAAATGGAGTATCCGTTCCTGGATTTCGATTACTCGAACTCCTTCGATCAGAATAACAATAACATAGCGGGTAATAATAACGATAGCGTAGTTCCAGTTCAAGCTCCGGTTATGAATCACACAGAGAGTTGCTTCGACATCGATTTTTGCAGATCGAAGCTCTCTTCCATTAGCTACCCCACGCAGTCGTTTAGTCGCCAATGTGTCTCATCTTCTTCTGTTGATGTCGGAGTGGTCCCAGACGGAGGAAAGACGGTGTCAGAAATCTCGTTTCCGTTCGGCAGGAACATGAGTAACAGTTCGGAATCAAGCGGAATCATATTGGCGGGCAATTCAACAAACCAATCGGGAAGTTCCCTGAGTGGTGGTATGAACAGGGAAGCTCGGGTTTTGAGATACAGGGAGAAGAGGAAGAACCGCAAGTTCGAGAAAACCATACGGTACAGTTCGAGAAAGGCTTATGCAGAAACTCGGCCGAGGATCAAAGGGCGGTTCGCCAAACGGACCGATATGGTGTCGGATTTCGACCGGCTCTTCAGCTCGATCGACCCCACCACAGATCTATTGCTCGATACTCAGTACGGCGTCGTCCCCTCGTTTTAA 1131 0.5111 MGIEMVSLKGFRSGGCSLPPKPCNSCKSAAAAVFCRADSAFLCMLCDNKIHSANKLSSRHERVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSANPLARRHERVPVEPFFDSADSIAKASAAAFNLLVPTDNGIGSDGFPQDESESASWLISNQNFNPKIMDVPDIKSGDLFFPEMEYPFLDFDYSNSFDQNNNNIAGNNNDSVVPVQAPVMNHTESCFDIDFCRSKLSSISYPTQSFSRQCVSSSSVDVGVVPDGGKTVSEISFPFGRNMSNSSESSGIILAGNSTNQSGSSLSGGMNREARVLRYREKRKNRKFEKTIRYSSRKAYAETRPRIKGRFAKRTDMVSDFDRLFSSIDPTTDLLLDTQYGVVPSF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0502 376 ProSiteProfiles CCT domain profile. 302 344 IPR010402 GO:0005515
Lele20g0502 376 ProSiteProfiles Zinc finger B-box type profile. 23 65 IPR000315 GO:0008270
Lele20g0502 376 Pfam CCT motif 302 344 IPR010402 GO:0005515
Lele20g0502 376 ProSiteProfiles Zinc finger B-box type profile. 61 108 IPR000315 GO:0008270
Lele20g0502 376 SMART bboxneu5 66 108 IPR000315 GO:0008270
Lele20g0502 376 SMART bboxneu5 18 65 IPR000315 GO:0008270
Lele20g0502 376 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 22 356 IPR045281 GO:0009909
Lele20g0502 376 Pfam B-box zinc finger 63 108 IPR000315 GO:0008270
Lele20g0502 376 Pfam B-box zinc finger 21 62 IPR000315 GO:0008270
Lele20g0502 376 CDD Bbox1_BBX-like 22 65 - -
Lele20g0502 376 CDD Bbox1_BBX-like 66 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0502 Lele-ChrLele20 12631843 12633077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0502 1 376 C2C2-CO-like Transcription Factor Family AT5G57660 50.259 9.94e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele20g0502 zf-B_box 4.6e-07 No_clan