Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0487 ATGGATAGTTCTACTGCAATTCGACCTTCTACACCGAGTTGTGCTTCATCACCGGGTTCGGCGCCTGGTTGCAATGATGATAGCCAGCGGGTTAAATTCTTATGTAGCTTTCTCGGAAATATAATGCCCCGTCCCCTAGATGGGAAACTTCGCTATGTTGGTGGAGAGACGCGAATTGTTAGTGTTCCACGAGATATTGGTTATGAGGAGTTGATGAGTAAGATGAGGGAGCTGTATGATGGGGTAGCAGTCTTAAAGTACCAGCAACCTGATGAGGATCTTGATGCCCTTGTCTCTGTTGTGAATGATGATGATGTGGTTAATATGATGGAAGAGTATGACAAATTGGGTTCAAGTGATGGATTCACTAGGCTCAGAATTTTTTTGTTCTCACAGTCTGAACAAGATGTTTCTTCACATTTCATTGATGGGGATGAGAGGGATACCGAGAGAAGGTATGTTGATGCATTGAATAATTTAAACGATGCTTCGGATTTTAGGAAGCACCATCAAGGTGAGTTTACTATGCTTGGTTCGGTTGAGGATCTACATGTAGCTGATCAGTTCTTTAATCCAATCAATGTGGATGGTGGCCTTCATAGCCAGAGAATTGGTGAGGTGCCCATGACACATTTTAACTTGCATCATCCCACACTACCTCACATTGGATCAGGGAAGCACCAGCAACCTATATCCCAGAGGTATAGTGACATAGATGCACCGTGGAGTCCTGCATATTACTCTCCTAGGCATCATGGTCACCATGACTCTAGATCAGTGGTAGAATTTCCATCTTCTCCTTCTTCTGCAAGATATCAGATGTCATTTGCAGAGCTACAAGATAAATGCATTGATAGAATGCCAGAAGAATATACTCGGCATCAGGTAAATCACCACCCTGTGTATGACAATCAACCACAATATTCTGATAATGTTATGTGGTATCCGACTGGACCTGCACCTAGTGAGAAGTCAGGTTTTCCTGGCAATATTTTTCATGGCCCTCATGTTATTGACGGGAATAGTATTTGTGAGCACTGCCGGATAAATTTCCAGAGAAGTCAATCTCATTTTGAGCACCCAAATATTAGTAATGGACTTCCACCAGTTGCTAATCCATGTGCAGAATGCCACTCAAAGAGGGATACTTTTATAATGAATGCAGATGCAAAGTTGCATCCTGTTATGTATCCTAATGAGCTAAATAATGATCACAGGTCTGCTTATAATGATACTCAAAATCATGAGAGAGGATGGGCAGTGCCACATCAAACAAATAATCGAGTTGAAGAAGCAAGGAGCCATGCTTCTGGATCAGGAAGATTGAATGATCATTATGTCCTTGATGGTTCTGGCATAAATTTCTCTCTTGGGCACAGCAGTGTGGCTGATGGACATCATTTGCCTTCAAATTACGTTCCCCAAAGAGCTGGGCCTGAATTGGGGCCTGAACTGTTTCATGATCAAGCTGTGGTTACAGCCCATCCACAAATTCCTCCTTTGGAAGAGCGCGGTGTGCAGTATGGGAACCCGCCTCCTTATGGAGTTGATAGTCATTACCCTGTGACACATGGACATGGACCTGGGCTTTCTTTCTGGAGAAATACTCCAGCTCCACTTCACATTGGACCATCTTATGAGGCATCCAGTAGTCCACCTCAGCAATTAAATGGTGTGTTAAATGCAGGAATAAGAGGAGAAGGTAGCCCAAGAATTTACATTGGACCTGATAGTCAAAGTCCTTGGGTTGATTCCTCACACAAAATGCCGGGTCATGATAGATTACCCATCCCAGAATTCCCTTATACTTATGCTGTGCAATTCAATCCAAGGACCGTTGGTCAAGAAAATCAACACCCAGTTGTTGTGGACACCATTCATTTCCCACAGGACATGAATGTTGGCATTCAATTGGAACCAGTGCAGCTACCAAAATCACCTTTTAATATGGCTCACAATAATGAGGTTTCAAACAATGGTACTCATAAATCTGAAGCAATTGGGTCGCTGAGTTTGCATGGTGAAGATAAAGGGGCGGAAAGTGAAAACAAGGTTGAGAACTCTAATGCTCAGAGTATATCTTTTTCAGAGCAAAACAAAATCACTGAGAATAATAGTGAAGCTGCTGCTTCTGTTGAGTTTATAAATGCAAAATCAAAACCTGTTGAAGAATGTGGTGATGTTGCGAAACTAGTAGATGGGGATCTAACTGCTCCTGAAGATTCCAAGCGTCTAGCTAATCAATTCAGTTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCATTGGAAGGAGCTGAAGAGGTGAAAGCTAGAGCTAAGGAGCACACCACTTCTCGGAGTCACAATTCAGCAATCAAAGATGACACAGCAAATGAAGGAAAGACAGGGAATGCTCATGGTGATTTAGAATTGGATTCTGATAACGACAATGTGGATACTTCTAAAATTGAACCTACAAAAGCCGAGGCAGAAGCTATTGCTAGAGGATTGCAGACAATTAAAAATGATGATTTGGAAGAGATCCGTGAACTAGGTTCAGGAACTTATGGGGCCGTCTACCACGGAAAATGGAAAGGTTCTGATGTGGCAATTAAGAGGATAAAAGCTAGCTGTTTTGCTGGAAGGCCCTCAGAAAGAGAAAGATTGATTGCAGATTTCTGGAAAGAGGCATTGATACTAAGTTCACTTCATCACCCAAATGTTGTGTCCTTCTATGGGATTGTCCGTGATGGCCCTGATGGTTCTTTAGCAACTGTAACTGAGTTCATGATCAATGGATCCCTGAAACAGTTCTTGCACAAGAAAGATAGAACTATAGATCGTCGTAAGAGGCTCATTATAGCTATGGATGCGGCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTAGTCAATATGAGAGATCCGCAGCGACCTATCTGCAAGATTGGTGATTTGGGTCTATCAAAGGTGAAACAGAACACTCTAGTATCTGGAGGGGTGCGGGGAACTTTGCCATGGATGGCACCTGAACTCCTAAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGATGTTTATTCATTCGGGATTGTTATGTGGGAATTGCTCACTGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGGGGTATTGTGAACAACACATTACGTCCCCAAATCCCAGCATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGCTGGGCTTCTGATCCAACAGAGAGGCCATCCTTCTCAGAAATCTCAAAGAAGCTAAGGACTATGGCTATACAAATGAATGTGAAGTAG 3342 0.4255 MDSSTAIRPSTPSCASSPGSAPGCNDDSQRVKFLCSFLGNIMPRPLDGKLRYVGGETRIVSVPRDIGYEELMSKMRELYDGVAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSSDGFTRLRIFLFSQSEQDVSSHFIDGDERDTERRYVDALNNLNDASDFRKHHQGEFTMLGSVEDLHVADQFFNPINVDGGLHSQRIGEVPMTHFNLHHPTLPHIGSGKHQQPISQRYSDIDAPWSPAYYSPRHHGHHDSRSVVEFPSSPSSARYQMSFAELQDKCIDRMPEEYTRHQVNHHPVYDNQPQYSDNVMWYPTGPAPSEKSGFPGNIFHGPHVIDGNSICEHCRINFQRSQSHFEHPNISNGLPPVANPCAECHSKRDTFIMNADAKLHPVMYPNELNNDHRSAYNDTQNHERGWAVPHQTNNRVEEARSHASGSGRLNDHYVLDGSGINFSLGHSSVADGHHLPSNYVPQRAGPELGPELFHDQAVVTAHPQIPPLEERGVQYGNPPPYGVDSHYPVTHGHGPGLSFWRNTPAPLHIGPSYEASSSPPQQLNGVLNAGIRGEGSPRIYIGPDSQSPWVDSSHKMPGHDRLPIPEFPYTYAVQFNPRTVGQENQHPVVVDTIHFPQDMNVGIQLEPVQLPKSPFNMAHNNEVSNNGTHKSEAIGSLSLHGEDKGAESENKVENSNAQSISFSEQNKITENNSEAAASVEFINAKSKPVEECGDVAKLVDGDLTAPEDSKRLANQFSFLPELIASVKKAALEGAEEVKARAKEHTTSRSHNSAIKDDTANEGKTGNAHGDLELDSDNDNVDTSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPICKIGDLGLSKVKQNTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIPAWCDPEWKSLMESCWASDPTERPSFSEISKKLRTMAIQMNVK 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0487 1113 CDD STKc_MAP3K-like 846 1103 - -
Lele20g0487 1113 SMART PB1_new 45 130 IPR000270 GO:0005515
Lele20g0487 1113 MobiDBLite consensus disorder prediction 673 698 - -
Lele20g0487 1113 Pfam Protein tyrosine and serine/threonine kinase 841 1103 IPR001245 GO:0004672|GO:0006468
Lele20g0487 1113 SMART serkin_6 840 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0487 1113 Gene3D Transferase(Phosphotransferase) domain 1 926 1113 - -
Lele20g0487 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 965 977 IPR008271 GO:0004672|GO:0006468
Lele20g0487 1113 Gene3D Phosphorylase Kinase; domain 1 825 925 - -
Lele20g0487 1113 Pfam PB1 domain 46 131 IPR000270 GO:0005515
Lele20g0487 1113 SUPERFAMILY CAD & PB1 domains 47 139 - -
Lele20g0487 1113 ProSitePatterns Protein kinases ATP-binding region signature. 846 867 IPR017441 GO:0005524
Lele20g0487 1113 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 833 927 - -
Lele20g0487 1113 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 928 1113 - -
Lele20g0487 1113 MobiDBLite consensus disorder prediction 1 24 - -
Lele20g0487 1113 SUPERFAMILY Protein kinase-like (PK-like) 832 1101 IPR011009 -
Lele20g0487 1113 CDD PB1_UP2 34 130 - -
Lele20g0487 1113 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 50 132 - -
Lele20g0487 1113 MobiDBLite consensus disorder prediction 770 822 - -
Lele20g0487 1113 MobiDBLite consensus disorder prediction 684 698 - -
Lele20g0487 1113 PRINTS Tyrosine kinase catalytic domain signature 922 935 IPR001245 GO:0004672|GO:0006468
Lele20g0487 1113 PRINTS Tyrosine kinase catalytic domain signature 959 977 IPR001245 GO:0004672|GO:0006468
Lele20g0487 1113 PRINTS Tyrosine kinase catalytic domain signature 1074 1096 IPR001245 GO:0004672|GO:0006468
Lele20g0487 1113 PRINTS Tyrosine kinase catalytic domain signature 1030 1052 IPR001245 GO:0004672|GO:0006468
Lele20g0487 1113 PANTHER SERINE-THREONINE PROTEIN KINASE 88 1105 - -
Lele20g0487 1113 ProSiteProfiles Protein kinase domain profile. 840 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0487 1113 Gene3D - 49 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0487 Lele-ChrLele20 12535315 12540390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0487 25 1113 MAP Kinase Kinase Kinase AT5G57610 55.327 0.0 1090
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele20g0487 PK_Tyr_Ser-Thr 3e-62 CL0016