Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele20g0487 | ATGGATAGTTCTACTGCAATTCGACCTTCTACACCGAGTTGTGCTTCATCACCGGGTTCGGCGCCTGGTTGCAATGATGATAGCCAGCGGGTTAAATTCTTATGTAGCTTTCTCGGAAATATAATGCCCCGTCCCCTAGATGGGAAACTTCGCTATGTTGGTGGAGAGACGCGAATTGTTAGTGTTCCACGAGATATTGGTTATGAGGAGTTGATGAGTAAGATGAGGGAGCTGTATGATGGGGTAGCAGTCTTAAAGTACCAGCAACCTGATGAGGATCTTGATGCCCTTGTCTCTGTTGTGAATGATGATGATGTGGTTAATATGATGGAAGAGTATGACAAATTGGGTTCAAGTGATGGATTCACTAGGCTCAGAATTTTTTTGTTCTCACAGTCTGAACAAGATGTTTCTTCACATTTCATTGATGGGGATGAGAGGGATACCGAGAGAAGGTATGTTGATGCATTGAATAATTTAAACGATGCTTCGGATTTTAGGAAGCACCATCAAGGTGAGTTTACTATGCTTGGTTCGGTTGAGGATCTACATGTAGCTGATCAGTTCTTTAATCCAATCAATGTGGATGGTGGCCTTCATAGCCAGAGAATTGGTGAGGTGCCCATGACACATTTTAACTTGCATCATCCCACACTACCTCACATTGGATCAGGGAAGCACCAGCAACCTATATCCCAGAGGTATAGTGACATAGATGCACCGTGGAGTCCTGCATATTACTCTCCTAGGCATCATGGTCACCATGACTCTAGATCAGTGGTAGAATTTCCATCTTCTCCTTCTTCTGCAAGATATCAGATGTCATTTGCAGAGCTACAAGATAAATGCATTGATAGAATGCCAGAAGAATATACTCGGCATCAGGTAAATCACCACCCTGTGTATGACAATCAACCACAATATTCTGATAATGTTATGTGGTATCCGACTGGACCTGCACCTAGTGAGAAGTCAGGTTTTCCTGGCAATATTTTTCATGGCCCTCATGTTATTGACGGGAATAGTATTTGTGAGCACTGCCGGATAAATTTCCAGAGAAGTCAATCTCATTTTGAGCACCCAAATATTAGTAATGGACTTCCACCAGTTGCTAATCCATGTGCAGAATGCCACTCAAAGAGGGATACTTTTATAATGAATGCAGATGCAAAGTTGCATCCTGTTATGTATCCTAATGAGCTAAATAATGATCACAGGTCTGCTTATAATGATACTCAAAATCATGAGAGAGGATGGGCAGTGCCACATCAAACAAATAATCGAGTTGAAGAAGCAAGGAGCCATGCTTCTGGATCAGGAAGATTGAATGATCATTATGTCCTTGATGGTTCTGGCATAAATTTCTCTCTTGGGCACAGCAGTGTGGCTGATGGACATCATTTGCCTTCAAATTACGTTCCCCAAAGAGCTGGGCCTGAATTGGGGCCTGAACTGTTTCATGATCAAGCTGTGGTTACAGCCCATCCACAAATTCCTCCTTTGGAAGAGCGCGGTGTGCAGTATGGGAACCCGCCTCCTTATGGAGTTGATAGTCATTACCCTGTGACACATGGACATGGACCTGGGCTTTCTTTCTGGAGAAATACTCCAGCTCCACTTCACATTGGACCATCTTATGAGGCATCCAGTAGTCCACCTCAGCAATTAAATGGTGTGTTAAATGCAGGAATAAGAGGAGAAGGTAGCCCAAGAATTTACATTGGACCTGATAGTCAAAGTCCTTGGGTTGATTCCTCACACAAAATGCCGGGTCATGATAGATTACCCATCCCAGAATTCCCTTATACTTATGCTGTGCAATTCAATCCAAGGACCGTTGGTCAAGAAAATCAACACCCAGTTGTTGTGGACACCATTCATTTCCCACAGGACATGAATGTTGGCATTCAATTGGAACCAGTGCAGCTACCAAAATCACCTTTTAATATGGCTCACAATAATGAGGTTTCAAACAATGGTACTCATAAATCTGAAGCAATTGGGTCGCTGAGTTTGCATGGTGAAGATAAAGGGGCGGAAAGTGAAAACAAGGTTGAGAACTCTAATGCTCAGAGTATATCTTTTTCAGAGCAAAACAAAATCACTGAGAATAATAGTGAAGCTGCTGCTTCTGTTGAGTTTATAAATGCAAAATCAAAACCTGTTGAAGAATGTGGTGATGTTGCGAAACTAGTAGATGGGGATCTAACTGCTCCTGAAGATTCCAAGCGTCTAGCTAATCAATTCAGTTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCATTGGAAGGAGCTGAAGAGGTGAAAGCTAGAGCTAAGGAGCACACCACTTCTCGGAGTCACAATTCAGCAATCAAAGATGACACAGCAAATGAAGGAAAGACAGGGAATGCTCATGGTGATTTAGAATTGGATTCTGATAACGACAATGTGGATACTTCTAAAATTGAACCTACAAAAGCCGAGGCAGAAGCTATTGCTAGAGGATTGCAGACAATTAAAAATGATGATTTGGAAGAGATCCGTGAACTAGGTTCAGGAACTTATGGGGCCGTCTACCACGGAAAATGGAAAGGTTCTGATGTGGCAATTAAGAGGATAAAAGCTAGCTGTTTTGCTGGAAGGCCCTCAGAAAGAGAAAGATTGATTGCAGATTTCTGGAAAGAGGCATTGATACTAAGTTCACTTCATCACCCAAATGTTGTGTCCTTCTATGGGATTGTCCGTGATGGCCCTGATGGTTCTTTAGCAACTGTAACTGAGTTCATGATCAATGGATCCCTGAAACAGTTCTTGCACAAGAAAGATAGAACTATAGATCGTCGTAAGAGGCTCATTATAGCTATGGATGCGGCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTAGTCAATATGAGAGATCCGCAGCGACCTATCTGCAAGATTGGTGATTTGGGTCTATCAAAGGTGAAACAGAACACTCTAGTATCTGGAGGGGTGCGGGGAACTTTGCCATGGATGGCACCTGAACTCCTAAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGATGTTTATTCATTCGGGATTGTTATGTGGGAATTGCTCACTGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGGGGTATTGTGAACAACACATTACGTCCCCAAATCCCAGCATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGCTGGGCTTCTGATCCAACAGAGAGGCCATCCTTCTCAGAAATCTCAAAGAAGCTAAGGACTATGGCTATACAAATGAATGTGAAGTAG | 3342 | 0.4255 | MDSSTAIRPSTPSCASSPGSAPGCNDDSQRVKFLCSFLGNIMPRPLDGKLRYVGGETRIVSVPRDIGYEELMSKMRELYDGVAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSSDGFTRLRIFLFSQSEQDVSSHFIDGDERDTERRYVDALNNLNDASDFRKHHQGEFTMLGSVEDLHVADQFFNPINVDGGLHSQRIGEVPMTHFNLHHPTLPHIGSGKHQQPISQRYSDIDAPWSPAYYSPRHHGHHDSRSVVEFPSSPSSARYQMSFAELQDKCIDRMPEEYTRHQVNHHPVYDNQPQYSDNVMWYPTGPAPSEKSGFPGNIFHGPHVIDGNSICEHCRINFQRSQSHFEHPNISNGLPPVANPCAECHSKRDTFIMNADAKLHPVMYPNELNNDHRSAYNDTQNHERGWAVPHQTNNRVEEARSHASGSGRLNDHYVLDGSGINFSLGHSSVADGHHLPSNYVPQRAGPELGPELFHDQAVVTAHPQIPPLEERGVQYGNPPPYGVDSHYPVTHGHGPGLSFWRNTPAPLHIGPSYEASSSPPQQLNGVLNAGIRGEGSPRIYIGPDSQSPWVDSSHKMPGHDRLPIPEFPYTYAVQFNPRTVGQENQHPVVVDTIHFPQDMNVGIQLEPVQLPKSPFNMAHNNEVSNNGTHKSEAIGSLSLHGEDKGAESENKVENSNAQSISFSEQNKITENNSEAAASVEFINAKSKPVEECGDVAKLVDGDLTAPEDSKRLANQFSFLPELIASVKKAALEGAEEVKARAKEHTTSRSHNSAIKDDTANEGKTGNAHGDLELDSDNDNVDTSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPICKIGDLGLSKVKQNTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIPAWCDPEWKSLMESCWASDPTERPSFSEISKKLRTMAIQMNVK | 1113 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele20g0487 | 1113 | CDD | STKc_MAP3K-like | 846 | 1103 | - | - | |
| Lele20g0487 | 1113 | SMART | PB1_new | 45 | 130 | IPR000270 | GO:0005515 | |
| Lele20g0487 | 1113 | MobiDBLite | consensus disorder prediction | 673 | 698 | - | - | |
| Lele20g0487 | 1113 | Pfam | Protein tyrosine and serine/threonine kinase | 841 | 1103 | IPR001245 | GO:0004672|GO:0006468 | |
| Lele20g0487 | 1113 | SMART | serkin_6 | 840 | 1107 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele20g0487 | 1113 | Gene3D | Transferase(Phosphotransferase) domain 1 | 926 | 1113 | - | - | |
| Lele20g0487 | 1113 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 965 | 977 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele20g0487 | 1113 | Gene3D | Phosphorylase Kinase; domain 1 | 825 | 925 | - | - | |
| Lele20g0487 | 1113 | Pfam | PB1 domain | 46 | 131 | IPR000270 | GO:0005515 | |
| Lele20g0487 | 1113 | SUPERFAMILY | CAD & PB1 domains | 47 | 139 | - | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Transcription factors information