Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0467 ATGGCTATGGTGTGGTCAGCCCCACCAGGCTTTGCATGGAGCAAAGCCCTAAAAGCCAAGTTTCAAACAGATTACACAAATAATGTAGCAGTAATCAATGACGATGATGGCCATCACAATATTAATGCTCCTCCTTCGTCACCATATTTCTCTGCAAAAAACCCTACAACTACTGGTTCTTCGAAATCTTGTGTTCATAATGAAGAAGAAGGAGAAGGAGAAGGGTTTAAGGGACTGAGAAGGTTAATACCAGGTGGAGAAGAAATGTGTGACATTGATGAAGAAGAAATGGCTCGAGAATTGGAGAGTTATATAAGGTGCTTGCAAATGCAGGTGAATATTCTTCAATGTTTGGCAGAGACACCTTGA 369 0.4119 MAMVWSAPPGFAWSKALKAKFQTDYTNNVAVINDDDGHHNINAPPSSPYFSAKNPTTTGSSKSCVHNEEEGEGEGFKGLRRLIPGGEEMCDIDEEEMARELESYIRCLQMQVNILQCLAETP 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0467 122 MobiDBLite consensus disorder prediction 36 72 - -
Lele20g0467 122 CDD bHLH_AtIBH1_like 77 119 IPR044549 GO:0006355
Lele20g0467 122 MobiDBLite consensus disorder prediction 44 64 - -
Lele20g0467 122 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 1 120 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0467 Lele-ChrLele20 12363821 12364189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0467 74 120 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43060 40.426 8.16e-06 40.8