Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0456 ATGGCTGCCGACGAGGGAAAGGAGAAGGTAGTGAAGAAGCTGCAGAAGAGCTACTTCGACGTGCTCGGATTATGCTGCTCGTCGGAGGTGCCTGTCATCGAGAACATCCTGAAAGCTCTGGAGGGGATCAAGGAGGTTTCCGTCATCGTGCCGTCCAGAACGGTCATTGTTGTCCACGATAGTTTTGTAATCTCACAAGCTCAAATCGTCAAGGCTCTGAATCAATCGAGATTTGAAGCAAATATGAGGTCAGTGAATGGGACAGAGAAGCTGAAGAGGAGAATGCCAAGCCCATATGCAATAGCTTGTGGTGTACTCCTTTTGCTTTCATTTTTAAAGTATGTGTACCGTCCTTTGGAATATCTGGCCCTCGGAGCTGTAGCTGCTGGTGCTTTCTCTATTCTTTTGAAAGCCGTGGCCTCCATTCGCAGCCTTAGGATTGACATCAATATTCTCATGCTCATTGCAGTTGTTGGGACAATTGCTATGAGCGATTATTTGGAAGCTGGCACCATAGTTTTTTTATCTTCAATTGCAGAATGGTTAGAGTCAAGGGCAAGCCACAGAGCGAGCGCAGCGATGTCATCGCTGTCGAACATAGCCCCTCAGAAAGCAGTGATAGCAGAAACGGGAGAAGCGGTCGACGCCGATGATGTGAAAGTTAACACCATCGTAGCCGTTAAAGCCGGCGAAGTGATACCCATTGATGGGATTGTTGTTGAAGGCAGCTGCGAAGTCGATGAGAAGACATTGACTGGGGAATCATACCCTGTACTCAAACAGAAGGATTCTCCTGTGTGGGCTGGTACAATCAACCTAAATGGTTACATTGAAGTGAAGACTACTGCACTTTCCGAGGACTGTGTGGTGGCCAAAATGGCGAAGCTTGTGGAAGAAGCTCAAAACAGCAAAACCAGCACCCAGAGATTGATAGATAAATTTGCCAAATTTTACACCCCAGCTGTTGTGGTCATATCAGCTCTTTTAGCGGTCATTCCACTTGTGTTAAGAGTAAATAATGAGAGACATTGGTGTCACTTTGCCTTGGTTGTTTTAGTAAGTGCATGTCCTTGTGCACTTGTCCTTTCTACGCCAGTTGCAACTTTCTGTGCTTATACCAAAGCAGCTAAATCTGGTCTTCTCATCAAAGGGGGTGATTATCTTGAAACCCTTGCAAAAATTAAGGTTATGGCTTTTGACAAAACTGGTACTATCACAAAGGGGGAATTTTCGGTGTCAAATTTCCAGTCTCTTTCTGATGACATTGATATGAACACATTACTACCATGGGTCACAAGCATCGAAAGCAAGTCAAGCCATCCGATTGCAGCAGCAATTGTGGACTATGGAAGGTCACTCTCCATTGAACCAAAACCCGAAAGGGTAACAAACTTTGAAAATTTTCCTGGAGAGGGCATTCATGGAAAAATTGATGGGAGAGATATTTACATTGGAAATAGAAAAATTGTCACTAGAGCTGGGTCTGAAACAGTTCCTGCCTCACAGGGTGACAATCTGGTTGGAAAAACAACTGGCTACGTCTACGCTGGAGCAACGCCAATTGGATTTTTCTCTCTGACAGATGCCTGCCGATCTGGCGCGAAGGAAGCAATAGGGCAGCTGAAATCATTGAGCATCACAACCTCAATGCTTACAGGAGATAGTCAAGCAGCTGCCATGCAAGCACATGCTCAGCTAGGGCATGTTCTGGAGCTAGTCCATGCAGAACTTTTACCTGAAGACAAAGCAAAAATCATAGAAGAATTCAAGAAGGAAGGACCAACAGCGATGGTTGGAGATGGCATAAACGATGCACCTGCACTGGCTGTAGCTGATATTGGCATCTCAATGGGGATTTCAGGTTCTGCGCTAGCAAGTGAGACAGGCAATATAATTCTTATGTCAAATGATCTAATGAAGATACCTCAAGCCATCAAGCTTGCAAGAAAATCTCACAGGAAAGTAATAGAAAATATCATCTTGTCAGTAATTACTAAAGCCGCGATTCTTAGCTTGGCCATTTGTGGTCATCCACTTGTTTGGGCTGCAGTTCTTGCTGATGTAGGAACATGCCTGTTGGTGATCTTAAACAGCATGCTACTTTTGAATGGGTCATCCAATCATAAAGGAAAATGTTGTAGACCTTCTTCTGGACCACACATCCATAATTATGGATGCAAGGCACCTCATGACAAGTTCTCTCATCACCATCACCATCATGAACATAAACATGAGCATCAGAACGATCACCATTGTTGCTCAGACAAGAAGAACGTGATGTCTCAGCCTCATAAATGCGCCTCCCTAATTACTGTCTCAAAGTGCCATTCTGGTCCTGCAATTTCAGGCTCTTGTGGACATGCTATGCATGGGAATATCATGGAGAGTCGTGCTCAATGTAATGTCAATGCCGAGTTCCATGAACCCAAGCATTGCCATCGAGGAAGCTGTGAGAACCAAGTTGGAGCCCATTTGCATGATGTGAAAAATCCAGTTTGTCTGGGTTCTCACAACTTGGATCTGCCTGCAGAAGGGAAGCACGCGACCGCATTAAACAGCAAGTCCCATGAAACAATACACTGCCATAATGGGAACTGTGACATGGGAACTCACTGTAGATCATCACCGATTTCTCCTTGCCATCTCAATTCTTCTGCTTCAATAGATTGCCACTTGATGTCTGATTGTAAAAATACAAAATGTCATTCTGAACCTGCCAAGAAGCACCAGGAAGACCACGTATGTGTCGACATTGACGAAGATGAGCATGCCAAGTCATACTCAATGCAAACTTGTGTATGTTCAGGAGAGAAAGAATGTGAAACTTCCACTGTTGTGTGCACTTGTGATAGTTCAAATGACGGACAAGTTGATGGTGCATGTTGTGCAGACGAGAGATCTTCAAAGAAATCCACAGCTTTCACTGTTGTGCATGCTTGTGTGAGTTTAGGCAAGAGAGAGAATGTTCATGTTGCAAGTGCCACATGA 2988 0.4454 MAADEGKEKVVKKLQKSYFDVLGLCCSSEVPVIENILKALEGIKEVSVIVPSRTVIVVHDSFVISQAQIVKALNQSRFEANMRSVNGTEKLKRRMPSPYAIACGVLLLLSFLKYVYRPLEYLALGAVAAGAFSILLKAVASIRSLRIDINILMLIAVVGTIAMSDYLEAGTIVFLSSIAEWLESRASHRASAAMSSLSNIAPQKAVIAETGEAVDADDVKVNTIVAVKAGEVIPIDGIVVEGSCEVDEKTLTGESYPVLKQKDSPVWAGTINLNGYIEVKTTALSEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAKFYTPAVVVISALLAVIPLVLRVNNERHWCHFALVVLVSACPCALVLSTPVATFCAYTKAAKSGLLIKGGDYLETLAKIKVMAFDKTGTITKGEFSVSNFQSLSDDIDMNTLLPWVTSIESKSSHPIAAAIVDYGRSLSIEPKPERVTNFENFPGEGIHGKIDGRDIYIGNRKIVTRAGSETVPASQGDNLVGKTTGYVYAGATPIGFFSLTDACRSGAKEAIGQLKSLSITTSMLTGDSQAAAMQAHAQLGHVLELVHAELLPEDKAKIIEEFKKEGPTAMVGDGINDAPALAVADIGISMGISGSALASETGNIILMSNDLMKIPQAIKLARKSHRKVIENIILSVITKAAILSLAICGHPLVWAAVLADVGTCLLVILNSMLLLNGSSNHKGKCCRPSSGPHIHNYGCKAPHDKFSHHHHHHEHKHEHQNDHHCCSDKKNVMSQPHKCASLITVSKCHSGPAISGSCGHAMHGNIMESRAQCNVNAEFHEPKHCHRGSCENQVGAHLHDVKNPVCLGSHNLDLPAEGKHATALNSKSHETIHCHNGNCDMGTHCRSSPISPCHLNSSASIDCHLMSDCKNTKCHSEPAKKHQEDHVCVDIDEDEHAKSYSMQTCVCSGEKECETSTVVCTCDSSNDGQVDGACCADERSSKKSTAFTVVHACVSLGKRENVHVASAT 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0456 995 Gene3D - 10 83 - -
Lele20g0456 995 Gene3D - 389 649 IPR023214 -
Lele20g0456 995 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 172 675 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0456 995 SUPERFAMILY HAD-like 397 699 IPR036412 -
Lele20g0456 995 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 149 701 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele20g0456 995 FunFam Copper-transporting ATPase 1, putative 187 301 - -
Lele20g0456 995 CDD P-type_ATPase_HM 100 700 - -
Lele20g0456 995 SUPERFAMILY HMA, heavy metal-associated domain 12 85 IPR036163 GO:0046872
Lele20g0456 995 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 11 703 - -
Lele20g0456 995 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 149 490 - -
Lele20g0456 995 PRINTS H+-transporting ATPase (proton pump) signature 630 655 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0456 995 PRINTS H+-transporting ATPase (proton pump) signature 598 614 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0456 995 SUPERFAMILY Calcium ATPase, transduction domain A 212 297 IPR008250 -
Lele20g0456 995 Gene3D - 186 301 - -
Lele20g0456 995 PRINTS P-type cation-transporting ATPase superfamily signature 544 554 - -
Lele20g0456 995 PRINTS P-type cation-transporting ATPase superfamily signature 247 261 - -
Lele20g0456 995 PRINTS P-type cation-transporting ATPase superfamily signature 622 634 - -
Lele20g0456 995 PRINTS P-type cation-transporting ATPase superfamily signature 398 412 - -
Lele20g0456 995 PRINTS P-type cation-transporting ATPase superfamily signature 598 617 - -
Lele20g0456 995 CDD HMA 19 80 IPR006121 GO:0046872
Lele20g0456 995 Pfam E1-E2 ATPase 208 377 - -
Lele20g0456 995 SUPERFAMILY Calcium ATPase, transmembrane domain M 149 491 IPR023298 -
Lele20g0456 995 FunFam Putative cadmium/zinc-transporting ATPase 3 11 84 - -
Lele20g0456 995 ProSitePatterns E1-E2 ATPases phosphorylation site. 400 406 IPR018303 -
Lele20g0456 995 FunFam Putative cadmium/zinc-transporting ATPase 3 409 530 - -
Lele20g0456 995 Gene3D - 409 530 IPR023299 GO:0000166
Lele20g0456 995 SFLD p-type atpase 381 650 IPR044492 -
Lele20g0456 995 ProSiteProfiles Heavy-metal-associated domain profile. 16 82 IPR006121 GO:0046872
Lele20g0456 995 SFLD Haloacid Dehalogenase 381 650 - -
Lele20g0456 995 Pfam haloacid dehalogenase-like hydrolase 394 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0456 Lele-ChrLele20 12251813 12262553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0456 12 786 Primary Pumps ATPases AT4G30110 60.504 0.0 1001