Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0454 ATGTCGCGCCACCGCCCACCCATGAAGAAACCAATTTGGATAATTGTCCTGGTTTTATTTGTATGCGTGTTTCTAATTTTTGCTTACATCTACCCTCCCAAAAACAGTTCAGCCTGTTATGTCTTTTCTTCTAGAGGTTGCGATGTTATTTCTCAGTGGCTTCCACCTGTTCCTGCACGGGAATACACAGATGCAGAGATTGCATCACAAGTGGTGATTAGGGATATTTTGAGTGCACCATATGTTCTTCCTAAAAATGCGAAAGTTGCCTTCATGTTTCTGACTCCTGGTTCTCTTCCATTTGAGAAATTGTGGGATAAGTTTTTCCAAGGTCATGAAGGGAAATTCTCAGTTTATGTGCATGCATCTAAGACTAGACCAGTTCATGTGAGCCGTTATTTTGTTAATCGGGATATACGCAGTGAACAGGTGGTGTGGGGTAAGATTTCAATGGTTGATGCAGAGAGACGGCTATTGGCAAATGCTTTACAAGATCCCGACAATCAGCAATTTGTTTTACTTTCTGATAGTTGCGTGCCACTGTATAGTTTTGACTATATATACGACTATCTGATGTATACAAATATTAGCTTTGTGGACTGTTTTAAGGATCCTGGTCCTCATGGTAATGGTAGGTATTCAGAACATATGTTACCTGAAGTTGAGGTGAAGAATTTCAGAAAGGGTGCACAGTGGTTCTCTATGAAGAGACAGCATGCTATTATAGTTATGGCTGACAATCTGTATTACTCAAAATTCCGTGATTACTGCAAGCCTGGTCTGGAAGGGAAGAATTGCATTCCTGATGAACATTACATGCCAACCTTCTTCACTATTGTTGATCCCGGTGGAATCGCAAACTGGTCAGTAACTCACGTGGACTGGTCTGAGAGAAAATGGCATCCAAAATCTTATAGGGCTCATGATGTCACATACGAGCTTTTGAAGAACAGTACGTCCGTTGATGTTAGTGTGCATGTTACCAGTGATGCCAAGAAAGAAGTACTAAGTTGGCCTTGCTTATGGAATGGGATTCAGAAGCCATGTTACCTATTTGCTAGGAAGTTCACTCCTGAAACACTGGACAATTTGTTGCTACTTTTTTCCAATTACTCCGCACCTTGA 1125 0.4124 MSRHRPPMKKPIWIIVLVLFVCVFLIFAYIYPPKNSSACYVFSSRGCDVISQWLPPVPAREYTDAEIASQVVIRDILSAPYVLPKNAKVAFMFLTPGSLPFEKLWDKFFQGHEGKFSVYVHASKTRPVHVSRYFVNRDIRSEQVVWGKISMVDAERRLLANALQDPDNQQFVLLSDSCVPLYSFDYIYDYLMYTNISFVDCFKDPGPHGNGRYSEHMLPEVEVKNFRKGAQWFSMKRQHAIIVMADNLYYSKFRDYCKPGLEGKNCIPDEHYMPTFFTIVDPGGIANWSVTHVDWSERKWHPKSYRAHDVTYELLKNSTSVDVSVHVTSDAKKEVLSWPCLWNGIQKPCYLFARKFTPETLDNLLLLFSNYSAP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0454 374 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 15 365 IPR044174 GO:0016757
Lele20g0454 374 Pfam Core-2/I-Branching enzyme 89 317 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0454 Lele-ChrLele20 12228118 12231715 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0899 21 6058067 6061906 Lele20g0454 20 12228118 12231715 CCT
Lele22g0900 22 6108012 6112098 Lele20g0454 20 12228118 12231715 CCT
Lele23g1152 23 17058979 17063012 Lele20g0454 20 12228118 12231715 CCT
Lele24g0873 24 5993335 5997321 Lele20g0454 20 12228118 12231715 CCT
Lele17g0548 17 17636307 17640305 Lele20g0454 20 12228118 12231715 hybridization