Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele20g0432 | ATGATGTTTGCAAAGCAAGGAGTGGATAGTCTGCTTAATAACCATCTTCATGATCAGCCATTAATGGGGGGGATGGATCTGATGAAGACAAACAAGAAGAAGAAATCAAAGAGAAGGACGACGACAACTACGACGATGACGGCGATGCTGCAAGAAGAAGAAAAGCTTGAGATTGTTGATCTTAGTGGCTTGTCTTTAGATTCTCTCCCTAATCCTTCTCCTAATCTAGTCACCATCACCAACTTGAACCTCTCCAACAACAATCTTCAGAGCATACCGGAATCATTGACGGCGAGATTGCTGAACGTGGCGGTGTTGGACGTTCACTCGAATCAACTCACGTCGCTTCCTAACTCTATAGGCTGCCTCTCCAAGCTTAAGATCTTGGACGTCTCCGGCAACCTCCTCGACTCCTTACCCAAAACCATTGAGAATTGCAGAGCATTAGAAGAACTGAATGCAAACTTCAATAAGCTAACGAAGCTCCCAGAAACCATAGGGTTTGAACTCGTCAACCTCAAGAAGCTATCAGTGAACTCAAACAAGCTTGTGTTCCTTCCTCACTCTACCTCCCATCTCACCGAACTCCGTGTTCTCGACGTTCGCCTGAATTGCCTCCGGTCACTACCGGAGGACCTCGAGAATCTCATCAACCTCAAAACCCTAAATGTGAGCCAAAATTTCCAATACCTAGAAACCCTACCTTACTCAGTAGGGCTCCTCTTATCCCTCGTAGAACTCGACGTCAGCTACAACAGAATCAAATCCTTGCCGGAGTCCATCGGCATTCTCAAGAAGTTAGAGAAGCTAAGCGTAGAAGGGAACCCGCTGACGTCGCCGCCGAAGGAGGTGATGGAGCAAGGGGTTGATAAAGTGAAGGAATATCTATCTCACAAGTTGAACTCAGTGCACGAGAGTCCAAAAAAGAAATCTTGGGTAGGTAAGTTAGTTAGGTATGGAAACAACAGACGACGTAGGCATACAGAGGAATTTGCTCTTGGACCTCATTATCGTACCATGGAAGGTCTTGGATCACCAAGTTTAATGGCCATGTTCTCTCCAAAGCGTCTCTTTTCACCTCGTCGTTCTGCGGAGATTTCGCATTAA | 1107 | 0.4616 | MMFAKQGVDSLLNNHLHDQPLMGGMDLMKTNKKKKSKRRTTTTTTMTAMLQEEEKLEIVDLSGLSLDSLPNPSPNLVTITNLNLSNNNLQSIPESLTARLLNVAVLDVHSNQLTSLPNSIGCLSKLKILDVSGNLLDSLPKTIENCRALEELNANFNKLTKLPETIGFELVNLKKLSVNSNKLVFLPHSTSHLTELRVLDVRLNCLRSLPEDLENLINLKTLNVSQNFQYLETLPYSVGLLLSLVELDVSYNRIKSLPESIGILKKLEKLSVEGNPLTSPPKEVMEQGVDKVKEYLSHKLNSVHESPKKKSWVGKLVRYGNNRRRRHTEEFALGPHYRTMEGLGSPSLMAMFSPKRLFSPRRSAEISH | 368 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele20g0432 | 368 | SMART | LRR_typ_2 | 193 | 216 | IPR003591 | - | |
| Lele20g0432 | 368 | SMART | LRR_typ_2 | 170 | 192 | IPR003591 | - | |
| Lele20g0432 | 368 | SMART | LRR_typ_2 | 76 | 99 | IPR003591 | - | |
| Lele20g0432 | 368 | SMART | LRR_typ_2 | 100 | 122 | IPR003591 | - | |
| Lele20g0432 | 368 | SMART | LRR_typ_2 | 264 | 287 | IPR003591 | - | |
| Lele20g0432 | 368 | SMART | LRR_typ_2 | 241 | 262 | IPR003591 | - | |
| Lele20g0432 | 368 | SMART | LRR_typ_2 | 147 | 169 | IPR003591 | - | |
| Lele20g0432 | 368 | SMART | LRR_typ_2 | 123 | 146 | IPR003591 | - | |
| Lele20g0432 | 368 | PANTHER | - | 100 | 299 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_bac_2 | 216 | 237 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_bac_2 | 100 | 119 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_bac_2 | 241 | 260 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_bac_2 | 170 | 189 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_bac_2 | 193 | 212 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_bac_2 | 123 | 142 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_bac_2 | 146 | 165 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_bac_2 | 264 | 283 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_bac_2 | 76 | 95 | - | - | |
| Lele20g0432 | 368 | Pfam | Leucine rich repeat | 79 | 136 | IPR001611 | GO:0005515 | |
| Lele20g0432 | 368 | Pfam | Leucine rich repeat | 172 | 227 | IPR001611 | GO:0005515 | |
| Lele20g0432 | 368 | SUPERFAMILY | L domain-like | 51 | 281 | - | - | |
| Lele20g0432 | 368 | Gene3D | Ribonuclease Inhibitor | 23 | 318 | IPR032675 | - | |
| Lele20g0432 | 368 | ProSiteProfiles | Leucine-rich repeat profile. | 78 | 99 | IPR001611 | GO:0005515 | |
| Lele20g0432 | 368 | ProSiteProfiles | Leucine-rich repeat profile. | 243 | 264 | IPR001611 | GO:0005515 | |
| Lele20g0432 | 368 | SMART | LRR_sd22_2 | 123 | 148 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_sd22_2 | 170 | 190 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_sd22_2 | 241 | 272 | - | - | |
| Lele20g0432 | 368 | SMART | LRR_sd22_2 | 193 | 215 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele20g0432 | Lele-ChrLele20 | 11967730 | 11972000 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele20g0432 | 78 | 285 | Receptor kinase-like Gene Family | AT5G62230 | 34.112 | 8.71e-15 | 73.9 |