Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0383 ATGTTTTGCCATCGCAGATGTTTGATGTTGGTGATAATCCAGCTACCTGTGATCCTTCTGAAACAAGGGAATGGTCAGAACCAGCATGTGCCTAATGATAAAATTGTTCCATTCCATCTCTATCACCATGGGAGGATGGTTGAGTTCCCCTCAATTCCTGCTCTTGAAGGATTAAGTCTTAAAGTCTCCTCCATAGACTATGCATCCCTCTCCTTAACTGTAAAGGATCCTGAAGGTTGTCTTCCCATACTCTTTCTACAACATCGTCTCTACAATTCATCCATTTATCCTTTAGAGTTTTATGATAGGGCAGAATACAATGTTACTTTCTTTGATTGCTCTTCTCTTGGGTCGAGATACCTCAGAAACGAAGGCATTTCCAGTTCACCTGTACAAGATATGTTCGTCTGCCCGATTTATGCCGTTTCCTCGGAAGATAGTATCCTGGCGTGGGACGTAGCTTTCTGCACCAAGATGTTTCAGCTAGTCTCGCCAATTCATTCATGGTACCTTCAGACAAACCAATTGCAATTCAAATTTCCACAACCAAAATCTGAAGTTGTAAAGCACAAAACCAGCAAGATTCCTGGAATTGTTTTACCAGGTTCAATTGTGCTGGTGGTGTTGCCCATTGCGTGCTTTTACATATATCGCTACTTCAAAGAGAAAGGAGATGATCAAGTGAGATTGGAAAAGTTTTTGGAGGATTATAAGGTACATAAACCCACTAGATTTTCTTATGCTGATCTGAAAAGAATCACAAATCATTTCAAGGATAAATTAGGTGAAGGAGCTCATGGAGAAGTATATAAAGGTAAGTTATCTACCGAAATCCAAGTGGCTGTAAAAGTATTAAATAACTCGGATAGCGATGGGCAAGACTTCATCAATGAAGTGGGGACTATGGGCAAAATTCATCACATCAATATAGTTCGTTTGTTGGGCTTTTGTGCTGATGGTTTCCATCGTGCTCTTGTTTATGACTTCTTTCCAAATGGTTCACTCCAAATGTTCATATCTTCGCCAGACAACAAAGAAAATTTCCTCGGATGGCTGAAATTGCAACAGTTAGCCATTGCCATAGCAAAAGGGATTGAATATCTTCATCAAGGTTGTGATTACCGAATTCTCCACTTTGACATCAATCCTCGTAACGTGTTATTAGATCACAATTTCGCCCCCAAAATTTCTGATTTTGGTCTAGCCAAATTGTGTTCTAAAACTCAAAGTGCAGTTTCAATGACAGCAGCAAGAGGAACCTTAGGATATATTGCACCTGAAGTTTTCTCTCGAAATTTTGGAAATGTGTCTTACAAATCAGATATTTACAGTTATGGAATGCTCCTGCTGGAAATGGTTGGTGGAAGAAAAAACGTTGAAACAAATAAAGAAAATTTTCAAATTTTATATCCAGAATGGATCCATAATTTGATTCAAGGGGGAGACATAAGTATTTACATAGAAGATGAAGTTGACATTAAGATTGCTAAAAAATTAGCAATTGTAGGATCTTGGTGCATTCAGTGGCATTCAATAAATCGTCCATCCATGAAAACGGTGATACAAATGTTAGAAGGAGAAGTAGATAAATTAAAGGTGCCTCCCACTTTGTTTGATTTTACTGCTTCTACCAATGCAAGTACCATTGTTCCTGCAAGGCATATGAATTTAGAGTTAGATGTGATTCATGAATTGGAATAA 1701 0.3827 MFCHRRCLMLVIIQLPVILLKQGNGQNQHVPNDKIVPFHLYHHGRMVEFPSIPALEGLSLKVSSIDYASLSLTVKDPEGCLPILFLQHRLYNSSIYPLEFYDRAEYNVTFFDCSSLGSRYLRNEGISSSPVQDMFVCPIYAVSSEDSILAWDVAFCTKMFQLVSPIHSWYLQTNQLQFKFPQPKSEVVKHKTSKIPGIVLPGSIVLVVLPIACFYIYRYFKEKGDDQVRLEKFLEDYKVHKPTRFSYADLKRITNHFKDKLGEGAHGEVYKGKLSTEIQVAVKVLNNSDSDGQDFINEVGTMGKIHHINIVRLLGFCADGFHRALVYDFFPNGSLQMFISSPDNKENFLGWLKLQQLAIAIAKGIEYLHQGCDYRILHFDINPRNVLLDHNFAPKISDFGLAKLCSKTQSAVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVETNKENFQILYPEWIHNLIQGGDISIYIEDEVDIKIAKKLAIVGSWCIQWHSINRPSMKTVIQMLEGEVDKLKVPPTLFDFTASTNASTIVPARHMNLELDVIHELE 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0383 566 FunFam PR5-like receptor kinase 330 535 - -
Lele20g0383 566 Gene3D Phosphorylase Kinase; domain 1 229 329 - -
Lele20g0383 566 PANTHER RUST RESISTANCE KINASE LR10-RELATED 229 537 IPR045874 GO:0004672
Lele20g0383 566 SUPERFAMILY Protein kinase-like (PK-like) 238 525 IPR011009 -
Lele20g0383 566 FunFam serine/threonine-protein kinase PBS1-like 224 329 - -
Lele20g0383 566 Pfam Protein kinase domain 257 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0383 566 Gene3D Transferase(Phosphotransferase) domain 1 330 533 - -
Lele20g0383 566 ProSiteProfiles Protein kinase domain profile. 255 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0383 566 ProSitePatterns Protein kinases ATP-binding region signature. 261 283 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0383 Lele-ChrLele20 11594872 11596696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0383 204 535 Receptor kinase-like Gene Family AT1G66910 46.491 7.43e-99 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele20g0383 Pkinase 1.1e-44 CL0016