Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0380 ATGTTGAGCGCCGATCTTCCTGAAGAAATTGTGGAGGAGATGTCCGTGAGGCTTCCTGTGAAATCCCTACTTCGATTCAAATCCGTGGCGAAATCCTGGTACGCACAAATCACTAATCCATCTTTTATAACCAGACAATTTGAATGGGCTGATTCAGTCACCGAAAACCGCCGCGACCAGCTGATTTTCCGATTGCACAATGTCACTCTGAAGCCTTGCATTTCTCTGATTTCCAAGTACCAGGAACCAAACGATATTGAATTGCCATTTCCTGATAAGGATGTGGAATACATATTCGTTTATGGTCAATGTAATGGGATTTTCTGTTTCTATGGGGTTTATGGAGGAGACAAAGCTGGTGGCCCCAGCCTGATCCTGTGGAATCCAGGAACAAAAGAGGTGAGGGTTCTTCCTGCATCTAAGAACACACCCAAAGACATGGTTTATATCATATTTGGGTTTGGGATTGATCCTATTACAAAGGATTTCAAGATTGTTCGATTTGGGAATTTGGATTTTGAAGGAAGAGAACAACTGCTGCCAGTTGAGGTATATGATCTGAGTACTGATTTATGGAGAACCATTGATGTTGTTGTCCCTGCTTTTCGATTGAGTTATCCAAAATGCAGGGCTTATTTGAATGGGATTTATCACTGGTTAACTGAGGATAACAATGATAAGGCCATTTTGTTCTTTGATTTCAGCAAGGAAGTGTTTGGGAAGATTCAATTGCCTCCTGAAATTGAACACCGTCAAGAATCAAGTGTTGCTGTGATTGATGAGAAACTTGCTTGTGTTGCTACATATTTCATGAACAATCATACATTTGAAATCTGGGTGATGAATGAGTACGGTGTTGAGAGTAGCTGGAGTAAGAAATTTGTTATTGGACCTCGCCCGGAGTTTGGATCATTTTTAGGGCTTTGGGGTGATGATGAGATTGTTGTTGAAGATAATGGTCAATTGATTGCATATAATTTGAAGAATGAGCAAATTCAGAGGTTTGAAATCCGTGGAGTTCCAAAACTGTTCAAAATGTTTGGCTATTTGGAAAGCTTGGTTCCTTTGAAGACCTAA 1077 0.4048 MLSADLPEEIVEEMSVRLPVKSLLRFKSVAKSWYAQITNPSFITRQFEWADSVTENRRDQLIFRLHNVTLKPCISLISKYQEPNDIELPFPDKDVEYIFVYGQCNGIFCFYGVYGGDKAGGPSLILWNPGTKEVRVLPASKNTPKDMVYIIFGFGIDPITKDFKIVRFGNLDFEGREQLLPVEVYDLSTDLWRTIDVVVPAFRLSYPKCRAYLNGIYHWLTEDNNDKAILFFDFSKEVFGKIQLPPEIEHRQESSVAVIDEKLACVATYFMNNHTFEIWVMNEYGVESSWSKKFVIGPRPEFGSFLGLWGDDEIVVEDNGQLIAYNLKNEQIQRFEIRGVPKLFKMFGYLESLVPLKT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0380 358 Pfam F-box associated 212 322 IPR006527 -
Lele20g0380 358 SUPERFAMILY Galactose oxidase, central domain 109 295 IPR011043 -
Lele20g0380 358 TIGRFAM F_box_assoc_1: F-box protein interaction domain 102 316 IPR017451 -
Lele20g0380 358 SUPERFAMILY F-box domain 5 54 IPR036047 GO:0005515
Lele20g0380 358 PANTHER BNAA05G37150D PROTEIN-RELATED 5 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0380 Lele-ChrLele20 11561027 11562103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0380 183 306 Carbohydrate Esterase AT1G25141 27.206 4.62e-07 48.5