Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0374 ATGTCGGACATGCGGGTGGTGAAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGGACCCATGGCTGGGGAGGAAGAGGAAGGAGAGGTGGGTTCGAGCTTGACGATGGAGAGGGTGGCTGTCGCCAAGAAGTTCATCGAGAACCATTACAGAGCTCAAAAGAAGCTCATACAGGATCGCAAAGAGAGGCGTTCAGTGCTGGAAAAGAAGTTAGCATCTTCTCATGTACCAGAAGAAGAACAGATATATCAACTGAAGGATTTAGAGCGCAAGGAGACTGAGTATATACGGTTAAAACGACACAAAATATGTGTCAGTGATTTTGACCTTCTAGATATTATTGGGAGGGGAGCCTTTGGAGAGGTAAGACTTTGTCGCGAGAAGAAATCAGGCAATATTTATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGGCAGGTTGAACATGTTAAAGCTGAGAGGAACTTATTAGCAGAAGTTGCGAGTCATTGCATCGTGAAACTATATTACTCCTTTCAGGATGCTGACTACTTATATCTGATAATGGAATATTTACCGGGTGGTGATTTAATGACTTTGCTGATTAGAGAAGAAACTTTGACTGAAAGTGTGGCTAGATTTTACATCGCTCAAAGCGTTTTGGCCATAGAATCTATTCATAAACACAATTACATTCATCGTGATATAAAACCTGACAACCTTCTGTTGGACAGAAATGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCACTTGATTGCACAAATTTATCATCAATAAATGAAGGTGAAGTCTTAGATGATGAGAACTTGAGTGATACCATGGATATCGATGGATCTTTACCAAATTCTAAAAAATGTGGAAGGCGTTGGAAAAGTCCCCTTGAACAACTTCAGCATTGGCAAATAAACAGGAGGAAGTTGGCATTTTCCACAGTTGGAACTCCAGACTATATTGCTCCTGAAGTCTTGCTTAAAAAGGGATATGGTGTGGAATGTGACTGGTGGTCTCTTGGTGCTATCCTGTATGAGATGCTCGTTGGTTATCCCCCGTTTTACTCCGATGATCCCGTAACAACATGTAGAAAGATTGTACATTGGAAACATCATTTAAAATTTCCAGAGGAGGCAAGGTTGACACCTGAGGCAATGAATCTAATTTGTAGGTTGCTTTGTGAAGCTGACCAAAGGCTTGGTACTAGAGGGGCAGATGAAATTAAAGCACATCCTTGGTTCAGAGATGTTGTATGGGATAAGCTCTATGAAATGGACGCAGCATTCAAACCACAAGTTTTTGGAGAGCTTGACACACAGAATTTTATGAAATTTGATGAGGTTGAACAACCAAAACCAGCTAGAATTGGATCCGGTCCCATCAGAAAGATGCTATTGACTCCTCAAGATCTTAGCTTTGTTGGTTATACATATAAGAATTTCGATGCTGTCAAGGGTATGCATCATATGGGTGATTCTGGAATAGACTATTCTTCCGGATTTGGGAGCAGCTCTTTCGTTCATCATTGCGAGATTGAAGGTGTGTGGTCTGATTGTTCTGCAAATTAG 1572 0.4167 MSDMRVVKEEEEEEEEVGPMAGEEEEGEVGSSLTMERVAVAKKFIENHYRAQKKLIQDRKERRSVLEKKLASSHVPEEEQIYQLKDLERKETEYIRLKRHKICVSDFDLLDIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVKAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDLMTLLIREETLTESVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCTNLSSINEGEVLDDENLSDTMDIDGSLPNSKKCGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAILYEMLVGYPPFYSDDPVTTCRKIVHWKHHLKFPEEARLTPEAMNLICRLLCEADQRLGTRGADEIKAHPWFRDVVWDKLYEMDAAFKPQVFGELDTQNFMKFDEVEQPKPARIGSGPIRKMLLTPQDLSFVGYTYKNFDAVKGMHHMGDSGIDYSSGFGSSSFVHHCEIEGVWSDCSAN 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0374 523 FunFam Non-specific serine/threonine protein kinase 191 258 - -
Lele20g0374 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 450 - -
Lele20g0374 523 SMART serkin_6 107 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0374 523 CDD STKc_NDR_like 105 480 - -
Lele20g0374 523 Gene3D Transferase(Phosphotransferase) domain 1 191 255 - -
Lele20g0374 523 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele20g0374 523 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Lele20g0374 523 Pfam Protein kinase domain 109 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0374 523 Pfam Protein kinase domain 308 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0374 523 Gene3D Transferase(Phosphotransferase) domain 1 314 433 - -
Lele20g0374 523 SUPERFAMILY Protein kinase-like (PK-like) 90 461 IPR011009 -
Lele20g0374 523 FunFam Non-specific serine/threonine protein kinase 314 433 - -
Lele20g0374 523 Gene3D Phosphorylase Kinase; domain 1 434 444 - -
Lele20g0374 523 MobiDBLite consensus disorder prediction 8 23 - -
Lele20g0374 523 SMART pkinase_C_6 416 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele20g0374 523 Gene3D Phosphorylase Kinase; domain 1 105 190 - -
Lele20g0374 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Lele20g0374 523 ProSiteProfiles Protein kinase domain profile. 107 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0374 523 MobiDBLite consensus disorder prediction 1 32 - -
Lele20g0374 523 FunFam Non-specific serine/threonine protein kinase 68 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0374 Lele-ChrLele20 11500289 11512449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0374 10 490 AGC Kinase Gene Family AT4G33080 75.104 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele20g0374 Pkinase 4.5e-43 CL0016