Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0371 ATGGAGAAACCTCAGAAGTTTTCAATGGTTGATGGAGGTTGCCTCACATGAAAAGCAAGCAAGGCTATGGAGGAAATATCTTCTACTGTTGCAGTACCATTTACACTTGGCAAGTTGACTCAGGAGTCATTAATAACAACAACCCACATGGAGATATCTGGGTTGAAGCTTATGGCTGCTAATACAGCAGCAGCTTTGATTTTGAATCCTACAATGGATGATTGTGAAAATCAAAGGGGTTGTTTAAGTTCACAGCATCAGATTACTACTGTATCTGCAGGTAAAAAGGAGAATCATGTTGCAGATGATGCCCTTGTTTCAGATTTGACTATTGGATGTGACAGAAATGGGGTTGGGAATGAATCCAACAATCAGAAAAGCTCTCAATCTGCTGCTGGGGACCAATCTTCAACTTTGAGGACTAATTGTTCTGAGAGTGATCCACCAATTAGTACCATCAAGGTTGAAGATGATATAGTATTAAAGCCAGAGCAGAAAATGGTCTCTGTTGAAATGGATATTGAGATTTATGATGGAAGTGGATCAGAAGGATGCGATTCTAAACCATCAGATTCAGTTCTAGCGATATCAGAAGAGAAAATATGCAGAAGGAGCTACCAGAATGGATTGGAAATTAGTAATGGAGCCCTTTGGGGATTTTCATCAATCCGTGGAAGGAGAGAAGAGATGGAAGATGCTATTGCAGTTGAACCTCAACTCTTGCAAGTCCCTTCACAGATGCTAATGGAAAACCATGAGACTGAAAACCCAAAATACTCAGAAGCCCACTTTTTTGGTGTCTATGATGGACATGGGGGCTGCCAGGTTGCTAATTACTGCCGGGAACGTCTTCATTCGGTGTTGATTGAGGAGATAGCAGCTGCAGGAAGCTTGGGAGAAAATAATGAAGGAGAAAACTGGCAGGACCAATGGAAGAAAGCATTCTGCAAGTGTTTTCAGAAAGTTGATTATGAGGTTGACGGAAAAAGTGAAGGCAACAATGATGGATCTGAGTCTAGTTCTGAACCTCTTGCTCCTGAAACTGTTGGTTCTACTGCTGTGGTGGCCATTTTAAGTCAAACTCACATAATAATTGCAAATTGTGGGGATTCAAGAGCAGTCTTGTGCCGTGGAAAAGAAGCTATTCCATTGTCTACTGACCACAAACCAAATAGGGAGGATGAGTGGGAAAGAATAGAAGCTGCGGGAGGAAGGGTCATACAGTGGAATGGGTACAGAGTTCTTGGGGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGATATTTGAAACCATGGATAATTCCTGAACCAGAAATACAGTTTATCCTCAGAGAGAAAAATGATGAGTGCCTTATTCTAGCCAGTGATGGTCTATGGGATGTCATGACAAATGAAGAAGCCTGCCAAGCTGCAAGAAACAGAATCCTTCTTTGGCACAAAAAGTATGGCAATGGCAATGGAAATGGAAACAACAATGTATCTGCAGAACAAGACGAAGCAGTTGATCCTGCAGCTCAGTTTGCTGCAGAGTATCTCTCCAGACTTGCCCTTCAAAGGGGAAGTAAAGATAACATATCTGTTATTGTGGTTGACTTGAAGGCTCAAAGAAAAGTTAAGACAAGGGCATAA 1629 0.4187 MEKPQKFSMVDGGCLTXKASKAMEEISSTVAVPFTLGKLTQESLITTTHMEISGLKLMAANTAAALILNPTMDDCENQRGCLSSQHQITTVSAGKKENHVADDALVSDLTIGCDRNGVGNESNNQKSSQSAAGDQSSTLRTNCSESDPPISTIKVEDDIVLKPEQKMVSVEMDIEIYDGSGSEGCDSKPSDSVLAISEEKICRRSYQNGLEISNGALWGFSSIRGRREEMEDAIAVEPQLLQVPSQMLMENHETENPKYSEAHFFGVYDGHGGCQVANYCRERLHSVLIEEIAAAGSLGENNEGENWQDQWKKAFCKCFQKVDYEVDGKSEGNNDGSESSSEPLAPETVGSTAVVAILSQTHIIIANCGDSRAVLCRGKEAIPLSTDHKPNREDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPEPEIQFILREKNDECLILASDGLWDVMTNEEACQAARNRILLWHKKYGNGNGNGNNNVSAEQDEAVDPAAQFAAEYLSRLALQRGSKDNISVIVVDLKAQRKVKTRA 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0371 542 MobiDBLite consensus disorder prediction 116 149 - -
Lele20g0371 542 PANTHER PROTEIN PHOSPHATASE 149 532 - -
Lele20g0371 542 SUPERFAMILY PP2C-like 214 533 IPR036457 -
Lele20g0371 542 MobiDBLite consensus disorder prediction 116 150 - -
Lele20g0371 542 CDD PP2Cc 219 532 IPR001932 -
Lele20g0371 542 ProSitePatterns PPM-type phosphatase domain signature. 264 272 IPR000222 GO:0043169
Lele20g0371 542 Gene3D - 207 542 IPR036457 -
Lele20g0371 542 SMART PP2C_4 207 530 IPR001932 -
Lele20g0371 542 FunFam Protein phosphatase 2C 51 211 540 - -
Lele20g0371 542 ProSiteProfiles PPM-type phosphatase domain profile. 217 532 IPR001932 -
Lele20g0371 542 Pfam Protein phosphatase 2C 219 525 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0371 Lele-ChrLele20 11482145 11485889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0371 197 541 PP2C-type Phosphatase Gene Family AT4G26080 57.514 7.50e-133 392