Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0366 ATGGTTTGGTTTCAATGCGAGGATTGTGGTGACAATCTGAAGAAACCCAAGTTACCGAATCATTTCAGAACTTGTTCTGCTTCTAAGTTATCTTGCATTGATTGTGGACAAATATTTGGGCAAGACACCGTTCAGCAGCACACACAATGTATGACAGAAATGGAAAAGTATGGTCCAAAAGGCCAAGGCAAAACGTCTAATGTTACAACTTCCAAACCTAACAATAATAACAAGCAAAAGCCTGAAGTTGATATTCATGTTGGGTTATCAGAAAGGCCTCCGTGGTTTTGTAGCCTTTGCAACACAAAAGCTACGAGTAAGCAAACACTTCTTCTCCATGCCGATGGAAAGAAACACAGGGCAAAAGCTCGGGCATTCCATGCTGCAAATCAACAACCAGTTCAGACAGACACACGTGCTTCAGATGCAAAGCTTCCAGTGGAGCATGCTTGTAATGATAAGGTCCAAGTCAACAGTAACGTAGAGCAGACAAAATTGCAAGATCCATCTGAACACAATAACTTGAAATCAGGGAATGAAATCTCTCCATCAAATAAAAAGAGGAAATCTTATGTGGTGGAGGATAAACCTAGCAGGAAAAAGGGCAGGGATGACAGTCCAGGTGAGTTGGGAAATGGGGAAGTAGTTCAGGCTGAGGGAGCAGAAGCTGGGGAAAAAGATCATTTGAAGAAAGACAAAATGGTTAACGACATGAAGAATATAAAGTGGAAGAAGTTTATCAAATCCGCATTGAAATCTCAGCCTGATGGAAAATTGAAGATGAAGAAGTTGAGAAAACATGTCTTGAAAGCCGTGCAGGAATCTGGCGTTGAAGTGGATGAAACTGAACTTAGTGAGGCACTTGAGCATAAGATCAATTCAACTTCCAGATTTGCAGTAGAGAAGAAGTATGTGCGTTTGGTGGCCAAGGATGGTGAGGAATAG 945 0.4159 MVWFQCEDCGDNLKKPKLPNHFRTCSASKLSCIDCGQIFGQDTVQQHTQCMTEMEKYGPKGQGKTSNVTTSKPNNNNKQKPEVDIHVGLSERPPWFCSLCNTKATSKQTLLLHADGKKHRAKARAFHAANQQPVQTDTRASDAKLPVEHACNDKVQVNSNVEQTKLQDPSEHNNLKSGNEISPSNKKRKSYVVEDKPSRKKGRDDSPGELGNGEVVQAEGAEAGEKDHLKKDKMVNDMKNIKWKKFIKSALKSQPDGKLKMKKLRKHVLKAVQESGVEVDETELSEALEHKINSTSRFAVEKKYVRLVAKDGEE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0366 314 Gene3D Classic Zinc Finger 89 131 - -
Lele20g0366 314 FunFam cell growth-regulating nucleolar protein-like 1 50 - -
Lele20g0366 314 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Lele20g0366 314 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Lele20g0366 314 Pfam Zinc-finger of C2H2 type 95 119 - -
Lele20g0366 314 SUPERFAMILY beta-beta-alpha zinc fingers 84 130 IPR036236 -
Lele20g0366 314 Gene3D - 1 50 - -
Lele20g0366 314 MobiDBLite consensus disorder prediction 163 233 - -
Lele20g0366 314 FunFam UBP1-associated proteins 1C 89 132 - -
Lele20g0366 314 MobiDBLite consensus disorder prediction 163 186 - -
Lele20g0366 314 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Lele20g0366 314 MobiDBLite consensus disorder prediction 187 208 - -
Lele20g0366 314 MobiDBLite consensus disorder prediction 56 81 - -
Lele20g0366 314 MobiDBLite consensus disorder prediction 62 81 - -
Lele20g0366 314 MobiDBLite consensus disorder prediction 122 141 - -
Lele20g0366 314 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 308 IPR039999 GO:0003677
Lele20g0366 314 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Lele20g0366 314 SMART ZnF_U1_5 92 126 IPR003604 GO:0003676|GO:0008270
Lele20g0366 314 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0366 Lele-ChrLele20 11455583 11458144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0366 1 144 C2H2 Transcription Factor Family AT2G19380 40.394 2.01e-40 147