Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele20g0364 | ATGATGTATAATAAGTCCATGCTAAAGAGAAAGAAATTGAATCCATCCACTGCATGTATTTCTGCAAATTTTTTGATACTTGGTGTTATTGATAGCTGTGAATATGAGGGCAAAATTTTAGGGATAGGTCAGGCAGCATTTCCTAGACCCTTTGCTGTTGCTTCATGTGCAATGGTTCTCAAAGGTCAAAACAGTGGGACGGTCCATACTCTATGTTTATCTTTGCAGTCTGCTCCTGTGAACATTATTGTTGGCTCTCATGTCTGGGTTGAAGATCCAGCACAAGCATGGATTGATGGAGAAGTGTTAAAAATCAATGGTGAAGAAGTCCATGTTCACACCACAGATGAAAAGACAGTTGTCACAAATATGTCAAAAGTTTTTCCCAAGGATAATGAAGCTCCTCCTGGAGGTGTTGATGACATGACAAAACTGTCATATTTGCATGAGCCTGGAGTCCTGCACAACTTGGCAACAAGATATGAGCTAAATGAAATCTATACATATACTGGAAATATCCTGATTGCCATAAACCCATTTCAAAGATTACCCCATCTGTATGATACTCACATGATGGAACAGTACAAAGGAGCTGCATTTGGAGAGTTGAGCCCCCATGTTTTTGCAGTTGCAGATGTTGCATACAGAGCCATGATCAATGAGGGTAAAAGCAACTCAATCTTGGTCAGCGGTGAAAGTGGTGCTGGTAAGACAGAGACAACGAAGATGCTCATGCGATATCTTGCATACCTAGGGGGCCGATCTGGAGTAGAAGGGCGAACAGTTGAACAGCAAGTTCTGGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTCGAAATAATAACTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAATTCGACCACAAGGGAAGAATCTCAGGGGCAGCCATACGTACTTACTTGCTTGAGAGGTCTCGTGTTTGCCAAATTTCAGATCCTGAACGAAATTACCATTGCTTTTACCTTCTTTGTGCTGCACCAGCTGAGGTAAAAGAGAAATATAAGCTTGGAAGTCCTAGTTCCTTCCATTACTTAAATCAATCAAAGTCCTATGAATTGGATGGAGTGGATGATGCGCATGAATATCTTGCTACTCGAAGGGCTATGGATATTGTTGGAATTAGTGAGGAAGAGCAGGAAGCAATTTTTAGGGTTGTGGCAGCAATTCTTCACCTTGGAAATATTGAATTCTCAAAAGGAGAGGAGATTGACTCTTCTGTCATCAAAGATGAGAATTCTAGATTCCATCTTAACATGACAGCTGAACTTCTTAAGTGTGATGCAAAGAGCTTGGAAGATGCATTGATCAAACGTGTGATGGTAACACCTGAGGAAGTCATTACAAGAACCCTTGATCCTATTGCAGCTCTTGGTAGCAGGGATGCATTGGCTAAAACCATTTATTCTCGCTTATTTGATTGGCTTGTGGAAAAAATTAACATTTCAATAGGGCAAGATCCAAATTCAAAATCTATCATTGGTGTTCTTGATATCTATGGATTTGAAAGTTTTAAGTTCAACAGTTTCGAGCAGTTTTGTATTAATTTTACAAATGAAAAGCTGCAACAACATTTTAATCAGCATGTCTTTAAGATGGAACAAGAGGAATATACCAAAGAAGAGATTGATTGGAGTTACATTGAGTTTGTTGATAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATAGCACTCCTTGATGAAGCCTGTATGTTTCCTAAGTCCACACATGAAACGTTTGCTCAGAAGTTGTACCAGACATTCAAAAACAACAAGCGCTTTGTCAAACCCAAACTTTCTCGTACTAGTTTCACCATATGTCATTATGCAGGAGAGGTACTGTACCAGGCTGATATGTTTCTTGACAAAAACAAGGATTACGTAGTTGCAGAACATCAGGCTCTACTGACAGCCTCAAAATGCTCGTTTGTGGTTGGTCTATTCCCACCTTCTCAAGAGGAGTCAACAAAACAATCTAAATTCTCTTCAATTGGATCGCGCTTTAAGTTACAACTTCAATCTTTGATGGAGACCTTAAGTTCAACAGAGCCTCACTATATCAGATGTGTGAAACCAAACAATGTCCTCAAGCCTGCTATTTTTGAAAACGTCAACATTATCCATCAATTACGCTGTGGTGGTGTGCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACTAGACGGACCTTTTATGAGTTTCTTAACCGATTTGGTGTTCTTGCCCCTGAAGTTTTGGAAGGAAACTCTGATGACAAAGTCGCATGCCAAATTATCCTTGGTAAAATGGGTTTGAAAGGATACCAGATAGGCAAGGCAAAGGTTTTCCTAAGAGCTGGTCAGATGGCTGAGTTGGATGCAAGAAGGGCTGTGGTGCTTGGAAATGCTGCAAGAACTATCCAAAGACAAATACGCACCTATATTGCACGCAAGGAGTTCGTTGAATTGCAGCAAGCTGCAATTTATCTGCAATCTAACTTGCGAGGCATATTGGCTCGGAAGCTGTATGAGCATATGCGACGTGAATCAGCAGCTATGAAGATAGAGAAGAACTTCAGAGGACACATTGCAAGGAAATCTTACCTAACCGCACGATCATCTGCAATCACATTACAGACAGGATTAAGGGCTATGAAGGCTCGTGATGGATTTAGATTTAGAAAGCAAACAAAGGCTGCAATTCTCATACAGGCTCGCGTGCGTCAACATATTGCATATTCTTATTATAGAAGATTGCAGAAGTCTGCAATTGTTACTCAATGTGGTTGGAGGCGAAGGGTTGCTAGGAGGGAACTCAGAAAACTTAAAATGGCTGCAAGAGAAACAGGGGCTCTTCAAGAAGCAAAGAACAAACTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAAAAGCGTTTGAGAACTGACTTGGAAGAGGAGAAATCACAAGAAATTTCCAAGTTAAAGGATGCTTTGCATGCAATGCAAATACAAGTAGAAGAAGCAAATGCCAAAGTTCTCAAAGAACGTGAGGCTGCTCGGAAAGCAATTGAAGATGCACCCCTAGTTATCAAGGAGACTCCTGTTATAGTTCAGGATACCGAAAAGCTTAATTCCTTAATGGCTGAGGTCAATAATTTGAAGGAGTCACTGATGACAGAAAGAGAGGCTAAAGAAGAGGCCAAGAGAGCTCATGCAGATACTGAGGCTAGAAATGCAGATCTGGTTAAGAGAGTAGAAGATTCTAGTCGCAAAGTGGATCAACTTCAGGAATTGGTTCAAAGATTGGAAGAAAAAGTATCCAATTCAGAGTCAGAAAACCAAGTTCTTCGTCAGCAAGCATTGGCTGTATCACCAACTGGAAAAGCTCTATCTGGAAGAACAAGGACTGTGATTATACAGCGGACACCGGAAAATGGAAATGCTTTAAATGGAGAATCAAAACCTGCCACGGACATGACTCTTGCTGTATCCAATGTGCGTGAACCTGAATCTGAGGGAAAGCCACAAAAATCTCTCAATGAGAAACAGCAAGAAAACCAGGACTTGTTGATCAAGTGCATATCACAAGATTTGGGATTTTCTGGGGGCAAACCTGTTGCTGCATGCATGATCTATAAATGTCTTCTTCACTGGAGATCATTTGAAGTCGAAAGAACAAGTGTTTTTGACCGTATTATTCAAACGATATCTTCGGCAGTTGAGGCGCAGGATAATGCTGATGTGTTAGCCTATTGGTTGTCTAATACATCAACTTTGTTGTTGCTTCTCCAACGAACTCTCAAAGCAAGTGGGGCAGCCAGCTTAACACCACAAAGGCGGAGAACAGCCTCAGCTTCTTTGTTTGGAAGAATGTCTCAAGGGCTAAGGGCATCTCCTCAAAGTGCTGGTTTACCATTTCTAAATGGTAGAGGGCTCAGTAGACTGGATGATTTAAGGCAAGTGGAAGCAAAATATCCCGCTCTGCTGTTTAAGCAGCAGCTTACTGCCTTCCTGGAAAAGATATATGGAATGATAAGAGACAACCTTAAGAAGGAGATATCTCCATTACTCGGATTGTGTATCCAGGCTCCAAGGACTTCACGCCAAGGTTTAGTGAAAGGACGCTCACATGCTAATGCAGTTGCGCAACAAACTTTAATTGCTCACTGGCAAAAAATTGCAAACAGCTTAAACAACTCTCTAAAGATAATGAAAGCGAACTATGTGCCCCCATTCTTGGTCTGTAAAGTGTTTACTCAAATATTCTCATTCATTAATGTTCAACTATTCAACAGTCTTCTGTTGCGTCGTGAGTGTTGTTCATTCAGTAATGGGGAGTACGTAAAGACAGGTTTGGCTGAATTAGAACAGTGGTGCAATGAGGCAACAGAGGAGTATGTTGGTTCAGCTTGGGAGGAACTGAAGCATATCAGGCAGGCTGTTGGGTTCCTGGTCATACATCAAAAACCCAAGAAAACCTTGAATGAAATAACAAAGGAGCTTTGCCCTGTTCTTAGCATACAACAGTTATACAGGATCAGTACAATGTACTGGGATGATAAATATGGCACGCACAGTGTGTCTACAGACGTTATTGCAAAAATGAGAGTCATGATGTCTGAAGACTCTGGCAATGCTGTCAGCAGCTCATTCCTACTGGATGATGACTCAAGTATTCCATTCTCAGTAGATGACATCTCTAAATCCATGCAACAAGTTGATGTATCTGATGTGGATCCTCCTCCATTAATCCGTGAGAACTCGGGATTTGGGTTCCTTCTAGCTCGGTCAGAGTGA | 4818 | 0.4108 | MMYNKSMLKRKKLNPSTACISANFLILGVIDSCEYEGKILGIGQAAFPRPFAVASCAMVLKGQNSGTVHTLCLSLQSAPVNIIVGSHVWVEDPAQAWIDGEVLKINGEEVHVHTTDEKTVVTNMSKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDHKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEVKEKYKLGSPSSFHYLNQSKSYELDGVDDAHEYLATRRAMDIVGISEEEQEAIFRVVAAILHLGNIEFSKGEEIDSSVIKDENSRFHLNMTAELLKCDAKSLEDALIKRVMVTPEEVITRTLDPIAALGSRDALAKTIYSRLFDWLVEKINISIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFVKPKLSRTSFTICHYAGEVLYQADMFLDKNKDYVVAEHQALLTASKCSFVVGLFPPSQEESTKQSKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENVNIIHQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLEGNSDDKVACQIILGKMGLKGYQIGKAKVFLRAGQMAELDARRAVVLGNAARTIQRQIRTYIARKEFVELQQAAIYLQSNLRGILARKLYEHMRRESAAMKIEKNFRGHIARKSYLTARSSAITLQTGLRAMKARDGFRFRKQTKAAILIQARVRQHIAYSYYRRLQKSAIVTQCGWRRRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRTDLEEEKSQEISKLKDALHAMQIQVEEANAKVLKEREAARKAIEDAPLVIKETPVIVQDTEKLNSLMAEVNNLKESLMTEREAKEEAKRAHADTEARNADLVKRVEDSSRKVDQLQELVQRLEEKVSNSESENQVLRQQALAVSPTGKALSGRTRTVIIQRTPENGNALNGESKPATDMTLAVSNVREPESEGKPQKSLNEKQQENQDLLIKCISQDLGFSGGKPVAACMIYKCLLHWRSFEVERTSVFDRIIQTISSAVEAQDNADVLAYWLSNTSTLLLLLQRTLKASGAASLTPQRRRTASASLFGRMSQGLRASPQSAGLPFLNGRGLSRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRQGLVKGRSHANAVAQQTLIAHWQKIANSLNNSLKIMKANYVPPFLVCKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCNEATEEYVGSAWEELKHIRQAVGFLVIHQKPKKTLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSTDVIAKMRVMMSEDSGNAVSSSFLLDDDSSIPFSVDDISKSMQQVDVSDVDPPPLIRENSGFGFLLARSE | 1605 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele20g0364 | 1605 | Gene3D | - | 514 | 698 | - | - | |
| Lele20g0364 | 1605 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 83 | 132 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele20g0364 | 1605 | FunFam | unconventional myosin-Va | 909 | 956 | - | - | |
| Lele20g0364 | 1605 | Gene3D | - | 327 | 385 | - | - | |
| Lele20g0364 | 1605 | ProSiteProfiles | IQ motif profile. | 833 | 862 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | Gene3D | - | 86 | 130 | IPR008989 | GO:0003774|GO:0005524|GO:0051015 | |
| Lele20g0364 | 1605 | FunFam | Myosin 2 | 387 | 502 | - | - | |
| Lele20g0364 | 1605 | ProSiteProfiles | IQ motif profile. | 812 | 836 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | Coils | Coil | 1043 | 1126 | - | - | |
| Lele20g0364 | 1605 | Coils | Coil | 952 | 1032 | - | - | |
| Lele20g0364 | 1605 | FunFam | Class V myosin | 514 | 658 | - | - | |
| Lele20g0364 | 1605 | PANTHER | MYOSIN | 133 | 1536 | - | - | |
| Lele20g0364 | 1605 | ProSiteProfiles | IQ motif profile. | 929 | 958 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | Pfam | IQ calmodulin-binding motif | 835 | 853 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | Pfam | IQ calmodulin-binding motif | 812 | 830 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | Pfam | IQ calmodulin-binding motif | 931 | 950 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | CDD | MYSc_Myo11 | 151 | 795 | IPR036018 | - | |
| Lele20g0364 | 1605 | FunFam | Myosin heavy chain | 327 | 382 | - | - | |
| Lele20g0364 | 1605 | PRINTS | Myosin heavy chain signature | 167 | 186 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele20g0364 | 1605 | PRINTS | Myosin heavy chain signature | 271 | 298 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele20g0364 | 1605 | PRINTS | Myosin heavy chain signature | 504 | 532 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele20g0364 | 1605 | PRINTS | Myosin heavy chain signature | 557 | 585 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele20g0364 | 1605 | PRINTS | Myosin heavy chain signature | 224 | 249 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele20g0364 | 1605 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 387 | 676 | - | - | |
| Lele20g0364 | 1605 | ProSiteProfiles | IQ motif profile. | 906 | 932 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | SMART | DIL_2 | 1423 | 1530 | IPR002710 | - | |
| Lele20g0364 | 1605 | Pfam | Myosin N-terminal SH3-like domain | 84 | 123 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele20g0364 | 1605 | SMART | iq_5 | 832 | 854 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | SMART | iq_5 | 880 | 902 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | SMART | iq_5 | 857 | 879 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | SMART | iq_5 | 928 | 950 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | SMART | iq_5 | 905 | 927 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | SMART | iq_5 | 809 | 831 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | Pfam | Myosin head (motor domain) | 139 | 795 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele20g0364 | 1605 | Gene3D | Kinesin motor domain | 140 | 737 | IPR036961 | - | |
| Lele20g0364 | 1605 | Gene3D | - | 742 | 808 | - | - | |
| Lele20g0364 | 1605 | Pfam | DIL domain | 1424 | 1527 | IPR002710 | - | |
| Lele20g0364 | 1605 | ProSiteProfiles | Dilute domain profile. | 1237 | 1548 | IPR002710 | - | |
| Lele20g0364 | 1605 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 108 | 859 | IPR027417 | - | |
| Lele20g0364 | 1605 | SMART | MYSc_2a | 131 | 808 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele20g0364 | 1605 | FunFam | unconventional myosin-Va | 861 | 908 | - | - | |
| Lele20g0364 | 1605 | Gene3D | - | 861 | 907 | - | - | |
| Lele20g0364 | 1605 | Gene3D | - | 810 | 860 | - | - | |
| Lele20g0364 | 1605 | Gene3D | - | 908 | 957 | - | - | |
| Lele20g0364 | 1605 | ProSiteProfiles | Myosin motor domain profile. | 137 | 807 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele20g0364 | 1605 | ProSiteProfiles | IQ motif profile. | 881 | 910 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 860 | 958 | IPR027417 | - | |
| Lele20g0364 | 1605 | ProSiteProfiles | IQ motif profile. | 858 | 887 | IPR000048 | GO:0005515 | |
| Lele20g0364 | 1605 | FunFam | unconventional myosin-Va | 812 | 860 | - | - | |
| Lele20g0364 | 1605 | CDD | MyosinXI_CBD | 1188 | 1571 | IPR037975 | GO:0007015 | |
| Lele20g0364 | 1605 | FunFam | Myosin XI D | 742 | 805 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele20g0364 | Lele-ChrLele20 | 11423109 | 11436033 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele20g0364 | 142 | 1605 | Myosins gene family | AT5G20490 | 81.831 | 0.0 | 2491 |