Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0356 ATGAGTTCCTCATTAGAGAGCCGCACTACTGCAGAACCCATAGATGCTTTGGGAGATAATAGTTCTACAAAAGGTTCCATAAGGAAGAGCTCCCGTGCAAATGCATCTTGCAGTGTCCATTTTTCTTCGGAATCTGCTGAAGCGCAGAGGAGACTTGCGTATTTCTCAAAGATTCAAAATGTTTTGAGTCACCCCTCTATGGCAGATTCATCAGCCGCATTTCAGGTTGATCAAACATTCCGAGATGTTTTTCAACTGAAACGTGGAAGCTATGCAGATCTCCCTCCTGAAAAAATTTCAGAGATGATGAAATCAAAGGCTCTAGATAATGCTCCCACTCAGTCGCTTTTAAGTGTTGTCAATGGTATTCTAGAAGAAGGTGTTGAGAGAAGAAATGGGGAAATACCTCCTCGTGTGGCTTGCTTGTTGAGAAAAGTTGTGCAAGAGATTGAACGTCGCATTGCAACACAGGCAGATCATTTACGAACACAAAACAATCTTTTTAAGGCTCGCGAAGAAAAATTCCAGTCAAGAATCAAAGTACTTGAAGCTCTTGCATCTGAAACTACGGAAGTGAGTGAGGTGTCTACTAACCAGGTTCAGCAGTTGAAGATTGAGAAGACCGGAGTGGAACATAAGAAGGCTGATGAGGAAGATATTAATATGTGGGTGAAAGAGCAAAATCAGAAAAATATGGAAATTTCAAGGTTGAAGCAAGAAATGGAAACAATAAAAGCCAGATATGAGGAAGATTTTAGTAAGTTGATGAAAGAGCAAGACCAAAAGAATATTGAAATTTCAAGGTTGAAGCAAAAAATGGAAACAATGGAAACTATATATGAACAAGATAGGATGATGGTCAATGAGGAAGATGCTAATAGGTTGATGAAAGAGGAAGACCAGAAAAATATGGAAATTTCAAGGGTGAAGCAAGAAATGGAAACACTGAAATCCAGATATGAGGGTGATGTTAGTAAGTTAACGAAAGAGCAGGATCAGAAGAATATGGAAATTTCAAGGTTGAAGCAAGAAATGGAAACAGTGAAAAGCGCGTATGACGAATATAGGAAAACGGCTAATGGGGAAGTTTCTAATAGCTTGATGAAAGAGGAAGATCAGCCAACTATAGAAATTTCAAGATTGAAGCAAGAAATGGGAACACTGAAATCCAGATATGAGGGTGATGTTAGTAAGTTGACGAAAGAGCAGGATCAGAAGAACATGGAAATTTCAAGGTTGAAGCAAGAAATGGAAACAATAAAAAACACGTACGAGGAAAATATGAAAAAGGCTAACGGGGAAGTTGCTAATAGGTTGATGAAAGAGGAAGATCAGAAAAATATAGAAATTTCAAGGGTGATGCAAGAAATGGAAACAATGAAATCCAGATATGAAGGTGATGTTAGTAAGTTGATGAAAGAGCAGGACCAGAAGAATATGGAAATTTCAAGGTTGAAGCAAGAAATAGAAACAATGAAAAGCACGTACGAGGAAGGTATGAAAAAGGCTAACGGGGAAGTTGCTGATAGGTTCATAAAAGAGGAAGATCAGAAAAATATGGAAATTTCTAGAGTGAAGCAAGAAATGGAAACAATGAAATCCAAATATGAGGGTGATATTAGTAAGTTGATGAAAGAGCAAGACCAGAAGAGTATGGAAATTTCAAGTTTGAAGCAAGAAATGAAAACAATGAAAAACACATACGAGGATGATATGAAAAAGGCTAACGGAGAAGTTGCTAATAGGTTGATGAAAGAGGAAGATCAAAAAAATATGGAAATTTCAAGGGTGAAGCAAGAAATGGAAACAATGAAATCGAGATATGAGGGTGATGTTAGTAAGTTGATGAAAGAGCAGGACCAGAAAAACATGGAGATTTCAAGCTTGAAGCGAGAAAAGGAATCAACAAAATCCAGATATGAGGGTGAGGTTAGTGAGTTGATGAAAGAGCAGGACCAGAAAAACATTGTGATTTCAAGTTTGAAGCAAGAAATGGAAACAATGAAAAGCACATATGAATTACGCTGCTCAAAGTTGGAAACAGAAGCTAAGGCAGAAATAGAACATAAGTCACAAGAATATGAACATTTGTTGAAAGATCTAAGACATAAGGTGAAACAGGTTGAGGCCTCTTTTGAGTCAGAATGTCAGAAGTGGAACGTGAAACAGAACTACCTGCATAATTCTTTGGATTTCCAATTCAGCATAGTACAGAAATTAAAATTGTCTTGGAAATCTGTCCAACAAGATGTCATGCAAGAGAAGAGGGTCTACTCTGACGAATGTCTAAATCTTCAACCACTTGTAAAGGCAGCTGAGAACCATCATGCTGTTCTTGCTGAAAATCGAAAACTGTTTAATGAAATTCAGGAATTAAAAGGAAACATCAGAGTTTATTGTCGAGTCAGACCATTTCTTCCTGGACAAAAGGAAAAAAAGTCTATTGTAGAACATGCTGGTGAAAATGATTTGGTTGTGGCCAATCCATCCAAACAAGGGAAAGATGCCCTTAGATCATTTAAATTCAATAGGGTTTTTGGTCCAACAACTACTCAAGTGGAGGTCTACTCTGATATCCAACCCTTTATACGATCAGTACTTGATGGATATAATCACAAGGGTTTAGCAGTACCTGATGCCAACATGGTCCCTGTGAAAGCAACTTCAGATGTTATGGACTTAATGGACATTGGACTAAAAAATAGGGCCAGCAGTGCCACTGCTATGAATGAAAGAAGCAGCCGTTCTCACAGTGTGGTCTCAATCCATGTTCGTGGGACGGATGCAAAGTCTGGTTCTAGTCTATATGGCAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAAGTAACTGGGGATAGGCTTAAGGAAGCACAACATATAAACAAATCACTGTCTGCCCTTGGAGATGTCATATTTGCCCTTTCGCAGAAGGGCTCCCATATACCATACAGAAACAGCAAGCTTACTCAACTCCTTCAAAGTTCTCTGGGTGGCCAAGCAAAAACACTTATGTTTGTCCAAGTCAATCCAGATGCAAATTCAGCTTCAGAAACTCTAAGCACATTAAAATTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGCTGCACGAAGTACCAAAGAAGGCAGAGATGTTAGAGAATTAATGGAGCAGGTGGCTTCTCTCAAGGACACTATTTCAGAAAAAGATGAAGAAATTGAGAGGCTACAATTACTCAAAGATCTGAAGAATAGCGTACTGATGGCTCTTCTGAAAAAACCATTTTCATTGGAAGCACAAAATCATCAGGACCAGGATGCTCTTCAATTGGAGGCAAATTTGTTATTTGTGAAGTCACCAGTTGGAGTTGGTTTTTCTCTCCCCAACACATCTTCTGACCTCACCATATTAGAGTATGGCTTTGTGGGCCACTGTATCCCTCAGCTGGCAGGACTCATCTTTGATCGAAACAAAGATAGAAGCAAATACTCATTTATCAATCTTAAAGGTGGGAATCCAGAAACCGAAAATTATTATGATTACAAAGGCCTTCTGGAACACGCATGGAGCCATGCAGTCATATCAAATCAGGAATATGACAAAGCCAAAAATGTGATTTCAAGCAATTTTATTGGTACACAGACAAGAACATATTGCAATTCAAGTGAGTTAAAACTTCACTATATTTTCTCTCACATGGCTCTTCACACCCACTTCATCATCTCTGTCTCTTTCACTGTTTTCATAGCCTCCTTCTTGTTCCTCCCAAGCTCTCATCTGTCTTGTAATGCCTTTGCAGCTCCTGCAATATTAGATTACAATGATAATGATTTGCTTGAATTCCCTTTGAATTTGGAGTTTCTGGAAGCTGAGTTCTTTTTGTACGGGGCTTTGGGCCAAGGGCTCGATGCTATTGATCCAAAGTTGGCCCAAGGTGGCCCATTACCAAATGGTGCAAAAATAGCCAACCTTGATCCTCTCACTAAGGATGTTATCCTACAATTCGGCTTTCAAGAAGTTGGGCATTTAAGGGCTATATTGAGCAAAGTGAAAGGGTTTCCAAGGCCATTATTGAATTTGAGCAGTGCAGCATTTGCTACAATAATGGACAATGCTTTTGGGAAACCTCTGAATCCACCATTTGATCCTTACGCCAATTCTATAAATTACTTGCTTGCCTCTTACGTCATTCCTTATGTTGGCCTCACTGGCTATGTTGGAGCCGCTCCTTTGCTCCAAAATGCAACTTCCAAGGAGCTAGTCGCAGGACTTTTGGGAGTAGAATCAGGGCAAGATGCAGTAATTAGAACATTACTCTATCAGCATAAAGATGAAGTCGTACATCCATATAAAGTGAGTGTGGCAGAGTTCACAAGCAGAATCTCAAGGCTCAGGGACAAGTTAGGGAAAATGGGAGTGAAAGATGAAGGACTTGTGGTAGCCAAAGAGAATGGGGCAGAGGGCAGGATTTCAGGCAACATTCTGGCAGGTGACAAGTTCTCTGTAGCTTATCCAAGACAGCCCCAAGAAGTTTTAAGGATTGTTTATGGTACTGGTGATGAGCATGTTCCTGGTGGTTTTCACCCTAATGGCGGCGATGGTCGTATTGCCAAATCTTTCCTTGCAAAAGCATTATATATATAATCAGACAAGTCAGACATCATGGGGGGACATATTGACTCAAGTTCATCAGAGAAGAAATCAGGCAATGGAGTGAATTACTTACCAACCTTCAATGCTGAGAATTTGCAACAAAACATGAAAACTATATATTACAGCCGAACATTTATGTCTATAATTGGTGGAGTTGTTGCTGGAATTTTGGGGTTTACTGGATTGAAAGGATTTGTCTTTTACTTCCTTGTCATGGCATTTACTTCCATTGGGCTCATAGCAAAAGCTAAATGTTCAATCCACTCATACTTTGATTCCTGGAACCGGGTGTTACTTGATGGCTTTGTTGGTGGTCTAATGTCCTTCGTGCTGTTCTGGACGTATCCTTCTCATGTATAA 5010 0.3956 MSSSLESRTTAEPIDALGDNSSTKGSIRKSSRANASCSVHFSSESAEAQRRLAYFSKIQNVLSHPSMADSSAAFQVDQTFRDVFQLKRGSYADLPPEKISEMMKSKALDNAPTQSLLSVVNGILEEGVERRNGEIPPRVACLLRKVVQEIERRIATQADHLRTQNNLFKAREEKFQSRIKVLEALASETTEVSEVSTNQVQQLKIEKTGVEHKKADEEDINMWVKEQNQKNMEISRLKQEMETIKARYEEDFSKLMKEQDQKNIEISRLKQKMETMETIYEQDRMMVNEEDANRLMKEEDQKNMEISRVKQEMETLKSRYEGDVSKLTKEQDQKNMEISRLKQEMETVKSAYDEYRKTANGEVSNSLMKEEDQPTIEISRLKQEMGTLKSRYEGDVSKLTKEQDQKNMEISRLKQEMETIKNTYEENMKKANGEVANRLMKEEDQKNIEISRVMQEMETMKSRYEGDVSKLMKEQDQKNMEISRLKQEIETMKSTYEEGMKKANGEVADRFIKEEDQKNMEISRVKQEMETMKSKYEGDISKLMKEQDQKSMEISSLKQEMKTMKNTYEDDMKKANGEVANRLMKEEDQKNMEISRVKQEMETMKSRYEGDVSKLMKEQDQKNMEISSLKREKESTKSRYEGEVSELMKEQDQKNIVISSLKQEMETMKSTYELRCSKLETEAKAEIEHKSQEYEHLLKDLRHKVKQVEASFESECQKWNVKQNYLHNSLDFQFSIVQKLKLSWKSVQQDVMQEKRVYSDECLNLQPLVKAAENHHAVLAENRKLFNEIQELKGNIRVYCRVRPFLPGQKEKKSIVEHAGENDLVVANPSKQGKDALRSFKFNRVFGPTTTQVEVYSDIQPFIRSVLDGYNHKGLAVPDANMVPVKATSDVMDLMDIGLKNRASSATAMNERSSRSHSVVSIHVRGTDAKSGSSLYGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKGSHIPYRNSKLTQLLQSSLGGQAKTLMFVQVNPDANSASETLSTLKFAERVSGVELGAARSTKEGRDVRELMEQVASLKDTISEKDEEIERLQLLKDLKNSVLMALLKKPFSLEAQNHQDQDALQLEANLLFVKSPVGVGFSLPNTSSDLTILEYGFVGHCIPQLAGLIFDRNKDRSKYSFINLKGGNPETENYYDYKGLLEHAWSHAVISNQEYDKAKNVISSNFIGTQTRTYCNSSELKLHYIFSHMALHTHFIISVSFTVFIASFLFLPSSHLSCNAFAAPAILDYNDNDLLEFPLNLEFLEAEFFLYGALGQGLDAIDPKLAQGGPLPNGAKIANLDPLTKDVILQFGFQEVGHLRAILSKVKGFPRPLLNLSSAAFATIMDNAFGKPLNPPFDPYANSINYLLASYVIPYVGLTGYVGAAPLLQNATSKELVAGLLGVESGQDAVIRTLLYQHKDEVVHPYKVSVAEFTSRISRLRDKLGKMGVKDEGLVVAKENGAEGRISGNILAGDKFSVAYPRQPQEVLRIVYGTGDEHVPGGFHPNGGDGRIAKSFLAKALYIXSDKSDIMGGHIDSSSSEKKSGNGVNYLPTFNAENLQQNMKTIYYSRTFMSIIGGVVAGILGFTGLKGFVFYFLVMAFTSIGLIAKAKCSIHSYFDSWNRVLLDGFVGGLMSFVLFWTYPSHV 1669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0356 1669 Gene3D - 540 573 - -
Lele20g0356 1669 Gene3D - 466 502 - -
Lele20g0356 1669 Gene3D - 323 356 - -
Lele20g0356 1669 Gene3D - 578 611 - -
Lele20g0356 1669 Gene3D - 508 539 - -
Lele20g0356 1669 Gene3D - 217 251 - -
Lele20g0356 1669 Gene3D - 289 322 - -
Lele20g0356 1669 Gene3D - 644 680 - -
Lele20g0356 1669 Gene3D - 612 643 - -
Lele20g0356 1669 Gene3D - 252 283 - -
Lele20g0356 1669 Gene3D - 394 431 - -
Lele20g0356 1669 Coils Coil 662 682 - -
Lele20g0356 1669 ProSiteProfiles Kinesin motor domain profile. 877 1037 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele20g0356 1669 Gene3D Kinesin motor domain 872 1079 IPR036961 -
Lele20g0356 1669 MobiDBLite consensus disorder prediction 1 29 - -
Lele20g0356 1669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 795 1075 IPR027417 -
Lele20g0356 1669 FunFam Kinesin-related protein3 874 1079 - -
Lele20g0356 1669 Coils Coil 292 358 - -
Lele20g0356 1669 Pfam Serine carboxypeptidase 1140 1222 IPR001563 GO:0004185|GO:0006508
Lele20g0356 1669 Gene3D Kinesin motor domain 736 871 IPR036961 -
Lele20g0356 1669 PRINTS Kinesin heavy chain signature 938 956 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele20g0356 1669 PRINTS Kinesin heavy chain signature 907 924 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele20g0356 1669 PRINTS Kinesin heavy chain signature 987 1008 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele20g0356 1669 Coils Coil 396 434 - -
Lele20g0356 1669 Gene3D alpha/beta hydrolase 1089 1238 IPR029058 -
Lele20g0356 1669 SUPERFAMILY alpha/beta-Hydrolases 1110 1215 IPR029058 -
Lele20g0356 1669 Coils Coil 454 502 - -
Lele20g0356 1669 Coils Coil 1051 1078 - -
Lele20g0356 1669 Coils Coil 227 272 - -
Lele20g0356 1669 Pfam EMC6 1589 1664 IPR029008 -
Lele20g0356 1669 Pfam Kinesin motor domain 873 1035 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele20g0356 1669 ProSiteProfiles Kinesin motor domain profile. 795 871 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele20g0356 1669 Pfam Microtubule binding 781 872 IPR031852 GO:0008017
Lele20g0356 1669 Coils Coil 580 650 - -
Lele20g0356 1669 Coils Coil 526 578 - -
Lele20g0356 1669 Coils Coil 684 711 - -
Lele20g0356 1669 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 258 - -
Lele20g0356 1669 Pfam Ferritin-like domain 1274 1440 - -
Lele20g0356 1669 SMART kinesin_4 793 1045 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0356 Lele-ChrLele20 11339646 11358824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0356 783 871 Calmodulin-binding Proteins AT5G65930 29.213 2.87e-08 57.0