Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0344 ATGGCAACGACATTTTCCGATGAGGTTCTGATCAACCAAGCTTCTTGTTTCTCCACCTTCTTCGATACGTCACCGTTTGGGTCCTACGATCATCGTCATCATCAACATCAACCTGACGAAAATACTAGTCATTGTAATTCCTTTGGATTCATGGACTTGCTGGGGGTCCAAGATTACGGTACCCCTTCTTTGTTCGATTGGCTTCCTGCCACCACCACTGCCATGGCGTCATCCGTCGTAGCTGATGTATCCCACCACCAATCCCTCCCGTCGCCGGCGAGCTCAGGCGGGGTGCTGAACACTACTCCAGTGTCTCCAAATTCCTGCTCGCTTTCGTCCTCGTCCAACGACGCGGCCGCTGTCGCCGCCACTGCCAGCAACGGCGGTAGTTTGGAGGAAGAACAGCAGAGTAGTAAAGCAGAGGATGAAGATATGAACGGAGGAAGAGGAGAAGACTCTAAGGAACAGGTGAAACCAAAGAAGAAGAAGCAGAAGAAGGAAAAAGAGCCAAGATTTGCGTTCATGACGAAAAGTGAAGTTGATCAGCTCGACGATGGCTATAGATGGCGTAAGTACGGCCAAAAAGCTGTCAAGAATAGTCCTTTTCCCAGGAGTTATTATCGATGCACGACGGTTGGTTGCGGCGTGAAGAAGAGGGTGGAGCGGTCGTCGGACGACCCTACCATCGTGGTGACGACATACGAGGGGCAGCACAAGCACCCAAGTCCGGCGGCGGTGACTCGGGCCGGCCTAGGGTACGGGTACGGTGGCGGTGGAGGTTTTGGTTCAGCCAACTTGATGGTTCCAGAGAGTTATGAATATCATCATCAGTTTCAGCAGCAGAGCATGTTGAATAATAATGTGTCTTCTTCTTCTTCTTCATCGCCATTGCTATATAATTCAAGCTCATCAATATTGAGCAATATTATTGGATCTAGCAGCAACTACACGAATATGACCTCATCAACGATGATGACGACGTCGTTTCTGGGCTCGTACCTTGGGGAGAACCATAACAGATCTAGAATAATGGATGAAGCTAGTCTGTTAAGGGACAATGGGCTTCTTCAGGACATTATCGTACCATCGCAGATGATGATGAACAAACATGAAAAGCAGTGA 1122 0.492 MATTFSDEVLINQASCFSTFFDTSPFGSYDHRHHQHQPDENTSHCNSFGFMDLLGVQDYGTPSLFDWLPATTTAMASSVVADVSHHQSLPSPASSGGVLNTTPVSPNSCSLSSSSNDAAAVAATASNGGSLEEEQQSSKAEDEDMNGGRGEDSKEQVKPKKKKQKKEKEPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPFPRSYYRCTTVGCGVKKRVERSSDDPTIVVTTYEGQHKHPSPAAVTRAGLGYGYGGGGGFGSANLMVPESYEYHHQFQQQSMLNNNVSSSSSSSPLLYNSSSSILSNIIGSSSNYTNMTSSTMMTTSFLGSYLGENHNRSRIMDEASLLRDNGLLQDIIVPSQMMMNKHEKQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0344 373 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 83 285 IPR044810 GO:0003700
Lele20g0344 373 MobiDBLite consensus disorder prediction 140 158 - -
Lele20g0344 373 SUPERFAMILY WRKY DNA-binding domain 175 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele20g0344 373 Gene3D WRKY domain 162 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele20g0344 373 SMART WRKY_cls 183 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g0344 373 ProSiteProfiles WRKY domain profile. 178 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g0344 373 MobiDBLite consensus disorder prediction 86 172 - -
Lele20g0344 373 Pfam WRKY DNA -binding domain 184 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g0344 373 MobiDBLite consensus disorder prediction 86 134 - -
Lele20g0344 373 FunFam WRKY transcription factor 57 169 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0344 Lele-ChrLele20 11240869 11242744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0344 46 366 WRKY Transcription Factor Family AT2G47260 36.950 5.92e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele20g0344 WRKY 1.5e-26 CL0274