Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0340 ATGGCTTCATCTCTGATCTCAAATCCTGTAGCTAATTCCGATCGGTCACGCGACGCTTCCAAGTGGAGGAGGAAGAAGAAAGCTCCGGCTCAGAAGAATCACCAAGAAGATCAGATTCAGAATCCCGCTAGATGGAAATCCCAGGCTCAGCAACAAATATACACCTCCAAGCTCCACCAAGCGTTGGCTCGCCTCAATCTCGGCGGCGGCGGCGGCGATCCTCCTCGACGTGGGAAAGAAGTCCGTGAAGCCGCCGATAAGGCCCTCGCCGTTACGGCTAAAGGGAGGAGTAGGTGGAGCAGGGCGATTCTCGCGAACCGGCTCAAGCTGAAGTTCAGGAACCACAAGAGGAAGAGGGTGGTGGCGACGGCGTCGAGGGTGGTTTACGGAAGTAGCCGGTCCAGGAAGCCAAGAGTGAGCGTTTTCCGGTTGAAGGGGAAGACCTTACCGGCTGTGCAGAGGAAGGTGAGGTTCCTTGGCCGGTTGGTCCCCGGTTGCCGGAAACAAGCATTTCCGGTAATTCTAGAGGAAGCAATCGATTACATATCGGCAGTTCAGATGCAAATACGAGCCATGACCGATCTCACCGACCGACTCTCCGCCTCTTCTTCTACCTCCACCTCCATACCACCCGGCCAACCCATGCTGTGA 651 0.5591 MASSLISNPVANSDRSRDASKWRRKKKAPAQKNHQEDQIQNPARWKSQAQQQIYTSKLHQALARLNLGGGGGDPPRRGKEVREAADKALAVTAKGRSRWSRAILANRLKLKFRNHKRKRVVATASRVVYGSSRSRKPRVSVFRLKGKTLPAVQRKVRFLGRLVPGCRKQAFPVILEEAIDYISAVQMQIRAMTDLTDRLSASSSTSTSIPPGQPML 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0340 216 CDD bHLH_AtIBH1_like 143 196 IPR044549 GO:0006355
Lele20g0340 216 MobiDBLite consensus disorder prediction 1 51 - -
Lele20g0340 216 MobiDBLite consensus disorder prediction 1 15 - -
Lele20g0340 216 MobiDBLite consensus disorder prediction 34 51 - -
Lele20g0340 216 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 47 199 IPR044660 GO:0006355
Lele20g0340 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 204 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0340 Lele-ChrLele20 11196688 11197338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0340 44 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 54.430 3.72e-49 158