Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0338 ATGCTTCAGGCATTGATGAATCTGCTCTCTCTCTGTTGGAAGCCATTCGGGCGTGGTGCTGATAATTTCGACACTATTGGAGCTGTTGGGAGCACTTTCGCGGGTGGGGCGGGCTGCAGAGAAGGTAAAGACGGCTTGCTCTGGTTCCGAGACGTAGGAAAGTATGGTTCCGGCGATTTCTCGATGGCCGTGGTTCAGGCGAATCAGGTTCTCGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTGGGAACCTTTGTAGGTGTCTACGATGGTCACGGAGGACCCGATGCATCTCGATATGTTTGCGATCACTTGTTTCGTAACTTTCAAGAAATAGCCGCTCAGTCACAGGGAGCTGTGACTGCTGAGACTATTCATAGAGCATTTCTCCAAACAGAAGAGGGGTTCACTTCTCTTGTGTCAGAATTATGGAATACTCGACCTCAGATTGCAACTACTGGGACTTGTTGTCTAGCTGGAGTGATATTTCAGCAGACCCTCTATGTGGCAAATGTTGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTTGGCAATACTGGAGGTATTGCTGCAATTCAGCTATCTACTGAACATAATGCAAATCTTGATGCAATCAGACAGGAACTTAAAGAATTACATCCGCATGATCCCCAAATTGTTGTCCTTAAACATGGAGTGTGGAGAGTTAAAGGCATTATTCAGGTTTCTAGGTCTATAGGAGACGTATATATGAAACATGTGCAGTTCAACCGGGAACCAATTAATCCAAAATTCAGACTTCCAGAGCCAATGCACATGCCTATCTTGTCTGCTAGTCCAACAATTCTTACTCATCCTCTCCAGCCCAGTGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGAAAAAGCAGTGGATATTGTCCACAGCAATCCACGTCCGGGTAGTGCCAAGAGACTTATCAAGGCTGCCCTCCAAGAAGCAGCAAGGAAACGAGAAATGAGATACTCGGACCTCCGCAAAATTGACAAGAAGGTTCGACGCCATTTTCACGATGATATAACTGTTATTGTTTTATTCTTAAACCACGATCTTATATCCAGAGGCACAGTGATAGACCCTCCTCTTTCAATTCGAAGTGCTCTTGATCACTGA 1152 0.4557 MLQALMNLLSLCWKPFGRGADNFDTIGAVGSTFAGGAGCREGKDGLLWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDHLFRNFQEIAAQSQGAVTAETIHRAFLQTEEGFTSLVSELWNTRPQIATTGTCCLAGVIFQQTLYVANVGDSRVVLGKKVGNTGGIAAIQLSTEHNANLDAIRQELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHVQFNREPINPKFRLPEPMHMPILSASPTILTHPLQPSDSFLIFASDGLWEHLSNEKAVDIVHSNPRPGSAKRLIKAALQEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGTVIDPPLSIRSALDH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0338 383 Pfam Protein phosphatase 2C 83 329 IPR001932 -
Lele20g0338 383 SUPERFAMILY PP2C-like 69 361 IPR036457 -
Lele20g0338 383 CDD PP2Cc 60 360 IPR001932 -
Lele20g0338 383 FunFam Probable protein phosphatase 2C 42 50 368 - -
Lele20g0338 383 Gene3D - 51 368 IPR036457 -
Lele20g0338 383 ProSiteProfiles PPM-type phosphatase domain profile. 59 360 IPR001932 -
Lele20g0338 383 PANTHER PROTEIN PHOSPHATASE 57 358 - -
Lele20g0338 383 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Lele20g0338 383 SMART PP2C_4 46 358 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0338 Lele-ChrLele20 11152994 11156380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0338 1 312 PP2C-type Phosphatase Gene Family AT3G17090 71.474 3.58e-158 445