Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0324 ATGGCGAATCATTTCCAGAACGGTATTGAAACGGCGAAGCTTGTTTGGTCGCGAATTCCGAACTCGGAGGAATCCCAGGAACCGGACGACACCGTTGGCTTGTTGAAGAAGAGTGATGGAAGTGGCGTTGAGAGCCTTGATTATGAAGTCATAGAGAATTATGCTTATCGGGAAGAACAGGCATTGGTACGTTCTTCTTCTTGCTGTTTGAGTTTCTATCTCAACCTTGAAGTATATTCTGGTAGTTTCAATTCTTTGGTCACTGATTCTGAATTGCGATGACCTTTATACGTGTCATGCGCTTGTACTGGAATTGTCGCCGTTTTCATCAATATTTCTGTTGAAAACTTCGCTGGCTGGAAGTTTTCATTGACATTTCATATAATTCAGAAATCCTATTTGGCGGGCTTTCTTGTATATGTCCTGATCAACTTGGTTTTGGTCTATTCCTCGGTATATATTATTACACAATTTGCTCCAGCAGCAGTTGGATCTGGTATTCCTGAAATTAAGGGATACTTGAATGGTAAGATGGACATTACAAGTGTCTCTGCATTGGGAGGTGGCCTTGCTTTGGGTAAAGAAGGCCCTCTTGTGCATACTGGTGCTTGCTTTGCTTCTTTGCTTGGACAAGTGGAGAAGTCAACTGATGTGGCGTGTCTTCTTCACTTCCGCTGTTGTGGCTGTAGTGGTACTAGAATTTCTCTTCTTATTTCACCCTTTGTTACCTGCTTTACTTTTAGTGCTCAAGAGGATTATTCCTTTGCTGAGTTACTGCCAATGGCTGTTATTGGGGTTATTGGAGGACTGCTAGGAGCCTTGTTCAACCAGCTTACTCTTTATGTGACTTCTTGGCGTCGAAATCATCTGCACAAGAAAGGGGGCCGAGTCAAGGATGACGCCATAAGGAATTTGTTTAGTGCAAAAACAATACATGAGTACAGTCCCCAAAAGCAATATTCGGATTCTGTGATGTTGTCCTATGTCGAAGTCCACTCCACCATATCAGACAATGGGCTCCGTGTCCCAGCCAAAGTCGCTGGCGTTGAAGTGAAAATAGCCTATAGGAGGCGCCTGACGGCCTCACTAGTGTTTGATTTGCACTCAAAACTGTGGATGGTTCGTCAGGGAGATCGTCCCCTGAACACTTATTATCTGGAAAAAACAAATCTATGTCAAGAACTTGATCAACTGGAGCAAAGGGTATGGAGAAATGCTGAAGACGTTGTTGCTTATCGACAGGAGTTAGAAGAAGAAAGGCTTTTTGAGGTTTTGGTTAGATTGAGCCCTATCTACGATGACATCCATGGACAGCTCCTTGGGCGAGTGCCCCTTCCTTCTGTACCAGAAGCCTTTGCCTTCCTCCGCGATGAAGAAACTCGGTGA 1386 0.4423 MANHFQNGIETAKLVWSRIPNSEESQEPDDTVGLLKKSDGSGVESLDYEVIENYAYREEQALVRSSSCCLSFYLNLEVYSGSFNSLVTDSELRXPLYVSCACTGIVAVFINISVENFAGWKFSLTFHIIQKSYLAGFLVYVLINLVLVYSSVYIITQFAPAAVGSGIPEIKGYLNGKMDITSVSALGGGLALGKEGPLVHTGACFASLLGQVEKSTDVACLLHFRCCGCSGTRISLLISPFVTCFTFSAQEDYSFAELLPMAVIGVIGGLLGALFNQLTLYVTSWRRNHLHKKGGRVKDDAIRNLFSAKTIHEYSPQKQYSDSVMLSYVEVHSTISDNGLRVPAKVAGVEVKIAYRRRLTASLVFDLHSKLWMVRQGDRPLNTYYLEKTNLCQELDQLEQRVWRNAEDVVAYRQELEEERLFEVLVRLSPIYDDIHGQLLGRVPLPSVPEAFAFLRDEETR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0324 461 Coils Coil 381 401 - -
Lele20g0324 461 Gene3D Clc chloride channel 95 220 - -
Lele20g0324 461 Gene3D Clc chloride channel 221 299 - -
Lele20g0324 461 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 221 297 - -
Lele20g0324 461 SUPERFAMILY Clc chloride channel 101 290 IPR014743 -
Lele20g0324 461 Pfam Voltage gated chloride channel 150 212 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele20g0324 461 Pfam Voltage gated chloride channel 227 294 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0324 Lele-ChrLele20 11011997 11018036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0324 249 298 Ion Channels AT5G26240 86.000 9.96e-21 93.6