Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0323 ATGTTTTATACCCTAGCAGTTGTAACATTTGGTACTGCAGTTCCAGCTGGTCAATTTGTTCCTGGAATTATGATAGGATCAACATATGGACGTCTTGTTGGCATGCTTGTTGTAAAATATTATGGAAAGCTCAACATTGAAGAGGGAACGTATGCTTTATTGGGAGCTGCATCTTTTCTTGGAGGTTCGATGCGAATGACAGTGTCTCTCTGTGTGATTATGGTTGAAATAACAAATAAAACTTTTACCTCTTATTATGCTTGTTCTCCTTATATCCAAGGTATATGTCTTGAACTCCCCTGTCAACAACGAACCACTTTAAAATGCACTAAGTATTTTCGACTACAGGCTGTGGGTGATGCTTTTAATGAGGGCTTATATGAAGAGCAGGCACGACTAAAGGGAATTCCATTGCTGGAATCAACGCCTAAATATGAGATGCGGAATATGACAGCAAAGGAGGCCTGTGGGAGCAGAAGGGTGGTTTCTTTCCCCCGTGTTGTCAAGGTTGCAGATGTAGTTTCCATTCTGCGGAGCAATGATCACAATGTTCCTATACCCATATTTGGGCGCAGTCATCTATTGGTAATTCTACAGTCAAAGGTTGATTTCCAGCATATTCCAATACCTGGTGATACCCGAGGCAAGGTCAACCCAGTAAGGCATCATTCTGATGAATTCAAAAAGCCTGTTTCTAGTAAAGGAATCTGTATAGATGATATACATCTAAGTTCAGATGACTTAGAAATGTACATAGATCTTGCCCCATTTTTGAACCCCTCACCATATATTGTACCTGAGGATGTCTTTGATAAAGGTCTACAATATTTTCCGGCAACTAGGTTTGAGGCATTTATTTGTTGTTCCACGCCCATCTCGTGTTCTTGGTTTGATAACCAGAAAAGATCTGTTGATTGA 918 0.4031 MFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMLVVKYYGKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNKTFTSYYACSPYIQGICLELPCQQRTTLKCTKYFRLQAVGDAFNEGLYEEQARLKGIPLLESTPKYEMRNMTAKEACGSRRVVSFPRVVKVADVVSILRSNDHNVPIPIFGRSHLLVILQSKVDFQHIPIPGDTRGKVNPVRHHSDEFKKPVSSKGICIDDIHLSSDDLEMYIDLAPFLNPSPYIVPEDVFDKGLQYFPATRFEAFICCSTPISCSWFDNQKRSVD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0323 305 PRINTS Chloride channel signature 49 65 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele20g0323 305 PRINTS Chloride channel signature 67 86 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele20g0323 305 PRINTS Chloride channel signature 14 34 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele20g0323 305 SUPERFAMILY Clc chloride channel 4 81 IPR014743 -
Lele20g0323 305 Gene3D Clc chloride channel 1 140 - -
Lele20g0323 305 Pfam Voltage gated chloride channel 4 80 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele20g0323 305 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0323 Lele-ChrLele20 10991098 10993942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0323 1 269 Ion Channels AT5G26240 67.376 2.11e-118 356